Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.19□□□□□ -1.42
PDGFAP04085 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.19□□□□□ -1.42
PDGFAP04085 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.19□□□□□ -1.42
PDGFAP04085 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PDGFAP04085 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.19□□□□□ -1.42
PDGFAP04085 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFAP04085 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFAP04085 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFAP04085 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PDGFAP04085 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFAP04085 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.18□□□□□ -1.42
PDGFAP04085 AC097714.1-201ENST00000511272 1647 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.18□□□□□ -1.42
PDGFAP04085 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
PDGFAP04085 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFAP04085 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFAP04085 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFAP04085 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFAP04085 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFAP04085 RNA5SP485-201ENST00000365053 119 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.18□□□□□ -1.42
PDGFAP04085 Y_RNA.419-201ENST00000384041 102 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 SNORA70.9-201ENST00000384370 135 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
PDGFAP04085 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFAP04085 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFAP04085 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFAP04085 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC6.18□□□□□ -1.42
PDGFAP04085 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC6.18□□□□□ -1.42
PDGFAP04085 AC007283.2-201ENST00000424739 197 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 AC137499.1-201ENST00000427602 88 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 OR2B7P-201ENST00000429302 934 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFAP04085 KCTD9P3-201ENST00000434597 1169 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 AC110602.1-201ENST00000437414 318 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC6.18□□□□□ -1.42
PDGFAP04085 AC007537.2-201ENST00000472093 511 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFAP04085 AC103851.1-201ENST00000506833 274 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.18□□□□□ -1.42
PDGFAP04085 TMEM248P1-201ENST00000510579 951 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFAP04085 SNORA74.1-201ENST00000516320 180 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 RNU6-410P-201ENST00000517006 107 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFAP04085 AC090572.1-201ENST00000519251 160 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFAP04085 EIF4A2P5-201ENST00000529914 499 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 AP000907.2-201ENST00000530827 353 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 AC023050.3-201ENST00000541142 333 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFAP04085 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFAP04085 MIR3135A-201ENST00000578460 77 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 CTSLP2-201ENST00000580501 394 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 AC015818.6-201ENST00000584274 634 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFAP04085 GLYATL1P2-202ENST00000588046 902 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFAP04085 AC010525.2-201ENST00000590920 195 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.18□□□□□ -1.42
PDGFAP04085 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFAP04085 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFAP04085 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFAP04085 SMIM12P1-201ENST00000603004 274 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 AL589743.6-201ENST00000611025 117 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.18□□□□□ -1.42
PDGFAP04085 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFAP04085 AC009248.2-201ENST00000619826 254 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 AC022106.2-201ENST00000620114 757 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 AC002550.2-201ENST00000621246 394 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.18□□□□□ -1.42
PDGFAP04085 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
PDGFAP04085 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.18□□□□□ -1.42
PDGFAP04085 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFAP04085 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFAP04085 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFAP04085 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFAP04085 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFAP04085 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFAP04085 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFAP04085 HSPA8P14-201ENST00000552265 1805 ntBASIC6.18□□□□□ -1.42
PDGFAP04085 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFAP04085 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFAP04085 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFAP04085 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFAP04085 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC6.17□□□□□ -1.42
PDGFAP04085 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
PDGFAP04085 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC6.17□□□□□ -1.42
PDGFAP04085 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDGFAP04085 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
PDGFAP04085 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.17□□□□□ -1.42
PDGFAP04085 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC6.17□□□□□ -1.42
PDGFAP04085 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.17□□□□□ -1.42
PDGFAP04085 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.17□□□□□ -1.42
PDGFAP04085 AC092079.1-201ENST00000558620 1985 ntBASIC6.17□□□□□ -1.42
PDGFAP04085 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.17□□□□□ -1.42
PDGFAP04085 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.17□□□□□ -1.42
PDGFAP04085 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms