Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.61□□□□□ -1.83
SNRNP200O75643 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNRNP200O75643 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNRNP200O75643 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.61□□□□□ -1.83
SNRNP200O75643 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNRNP200O75643 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.61□□□□□ -1.83
SNRNP200O75643 VN1R25P-201ENST00000443385 738 ntBASIC3.61□□□□□ -1.83
SNRNP200O75643 RPL7L1P1-201ENST00000448259 785 ntBASIC3.61□□□□□ -1.83
SNRNP200O75643 VN1R40P-201ENST00000455196 941 ntBASIC3.61□□□□□ -1.83
SNRNP200O75643 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.61□□□□□ -1.83
SNRNP200O75643 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.61□□□□□ -1.83
SNRNP200O75643 MIR5187-201ENST00000583479 76 ntBASIC3.61□□□□□ -1.83
SNRNP200O75643 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.61□□□□□ -1.83
SNRNP200O75643 MIR4727-201ENST00000622232 55 ntBASIC3.61□□□□□ -1.83
SNRNP200O75643 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNRNP200O75643 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SNRNP200O75643 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.61□□□□□ -1.83
SNRNP200O75643 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNRNP200O75643 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNRNP200O75643 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNRNP200O75643 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNRNP200O75643 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNRNP200O75643 MIR199A2-201ENST00000385289 110 ntBASIC3.61□□□□□ -1.83
SNRNP200O75643 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SNRNP200O75643 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.61□□□□□ -1.83
SNRNP200O75643 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.61□□□□□ -1.83
SNRNP200O75643 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.61□□□□□ -1.83
SNRNP200O75643 RPS3AP50-201ENST00000487064 803 ntBASIC3.61□□□□□ -1.83
SNRNP200O75643 AC108941.1-201ENST00000502853 530 ntBASIC3.61□□□□□ -1.83
SNRNP200O75643 AC109458.1-201ENST00000508858 316 ntBASIC3.61□□□□□ -1.83
SNRNP200O75643 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SNRNP200O75643 AC008126.1-201ENST00000549019 480 ntBASIC3.61□□□□□ -1.83
SNRNP200O75643 MIR4429-201ENST00000580105 73 ntBASIC3.61□□□□□ -1.83
SNRNP200O75643 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.61□□□□□ -1.83
SNRNP200O75643 ATE1-AS1-202ENST00000636460 506 ntBASIC3.61□□□□□ -1.83
SNRNP200O75643 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNRNP200O75643 AC097504.1-201ENST00000515103 2415 ntBASIC3.6□□□□□ -1.83
SNRNP200O75643 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SNRNP200O75643 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.6□□□□□ -1.83
SNRNP200O75643 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNRNP200O75643 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SNRNP200O75643 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SNRNP200O75643 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNRNP200O75643 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNRNP200O75643 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.6□□□□□ -1.83
SNRNP200O75643 AL359837.1-201ENST00000381357 287 ntBASIC3.6□□□□□ -1.83
SNRNP200O75643 MIR554-201ENST00000384874 96 ntBASIC3.6□□□□□ -1.83
SNRNP200O75643 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.6□□□□□ -1.83
SNRNP200O75643 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SNRNP200O75643 AL391219.1-201ENST00000422570 483 ntBASIC3.6□□□□□ -1.83
SNRNP200O75643 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SNRNP200O75643 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNRNP200O75643 AC026726.1-201ENST00000512859 601 ntBASIC3.6□□□□□ -1.83
SNRNP200O75643 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.6□□□□□ -1.83
SNRNP200O75643 KLKP1-201ENST00000595979 403 ntBASIC3.6□□□□□ -1.83
SNRNP200O75643 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.6□□□□□ -1.83
SNRNP200O75643 AC000123.3-201ENST00000624029 4975 ntBASIC3.6□□□□□ -1.83
SNRNP200O75643 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SNRNP200O75643 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNRNP200O75643 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SNRNP200O75643 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.6□□□□□ -1.83
SNRNP200O75643 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SNRNP200O75643 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.6□□□□□ -1.83
SNRNP200O75643 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.59□□□□□ -1.83
SNRNP200O75643 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
SNRNP200O75643 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SNRNP200O75643 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.59□□□□□ -1.83
SNRNP200O75643 AC007066.1-201ENST00000392902 381 ntBASIC3.59□□□□□ -1.83
SNRNP200O75643 AC093578.1-201ENST00000415219 368 ntBASIC3.59□□□□□ -1.83
SNRNP200O75643 OR51A6P-201ENST00000418680 1004 ntBASIC3.59□□□□□ -1.83
SNRNP200O75643 AL035246.1-201ENST00000433554 1255 ntBASIC3.59□□□□□ -1.83
SNRNP200O75643 RN7SKP13-201ENST00000515933 244 ntBASIC3.59□□□□□ -1.83
SNRNP200O75643 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.59□□□□□ -1.83
SNRNP200O75643 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.59□□□□□ -1.83
SNRNP200O75643 AC020914.6-201ENST00000594327 272 ntBASIC3.59□□□□□ -1.83
SNRNP200O75643 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.59□□□□□ -1.83
SNRNP200O75643 AL391497.1-201ENST00000608671 547 ntBASIC3.59□□□□□ -1.83
SNRNP200O75643 AC015967.1-201ENST00000619893 476 ntBASIC3.59□□□□□ -1.83
SNRNP200O75643 AC243312.2-201ENST00000623340 601 ntBASIC3.59□□□□□ -1.83
SNRNP200O75643 AC119674.1-207ENST00000641355 633 ntBASIC3.59□□□□□ -1.83
SNRNP200O75643 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
SNRNP200O75643 AC073073.2-201ENST00000609827 2578 ntBASIC3.59□□□□□ -1.83
SNRNP200O75643 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SNRNP200O75643 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SNRNP200O75643 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.59□□□□□ -1.84
SNRNP200O75643 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SNRNP200O75643 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
SNRNP200O75643 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.59□□□□□ -1.84
SNRNP200O75643 MIR490-201ENST00000384865 128 ntBASIC3.59□□□□□ -1.84
SNRNP200O75643 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
SNRNP200O75643 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.59□□□□□ -1.84
SNRNP200O75643 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.59□□□□□ -1.84
SNRNP200O75643 SNORA71B-202ENST00000439232 272 ntBASIC3.59□□□□□ -1.84
SNRNP200O75643 RPL21P129-201ENST00000491732 478 ntBASIC3.59□□□□□ -1.84
SNRNP200O75643 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.59□□□□□ -1.84
SNRNP200O75643 RN7SKP18-201ENST00000516005 275 ntBASIC3.59□□□□□ -1.84
SNRNP200O75643 SUMO2P20-201ENST00000520803 283 ntBASIC3.59□□□□□ -1.84
SNRNP200O75643 OR4A12P-201ENST00000530847 918 ntBASIC3.59□□□□□ -1.84
SNRNP200O75643 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.59□□□□□ -1.84
SNRNP200O75643 AC023161.2-201ENST00000551218 780 ntBASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms