Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 RN7SKP210-201ENST00000459176 261 ntBASIC11□□□□□ -0.65
MSH5O43196 RN7SL272P-201ENST00000487762 289 ntBASIC11□□□□□ -0.65
MSH5O43196 RN7SL388P-201ENST00000498736 339 ntBASIC11□□□□□ -0.65
MSH5O43196 RNU6-970P-201ENST00000516312 107 ntBASIC11□□□□□ -0.65
MSH5O43196 IGHVII-44-2-201ENST00000517728 250 ntBASIC11□□□□□ -0.65
MSH5O43196 ERHP1-201ENST00000523006 310 ntBASIC11□□□□□ -0.65
MSH5O43196 RPL10P15-201ENST00000585756 315 ntBASIC11□□□□□ -0.65
MSH5O43196 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC11□□□□□ -0.65
MSH5O43196 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MSH5O43196 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
MSH5O43196 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
MSH5O43196 ZSCAN9-204ENST00000527436 2062 ntTSL 1 (best) BASIC11□□□□□ -0.65
MSH5O43196 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MSH5O43196 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC11□□□□□ -0.65
MSH5O43196 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC11□□□□□ -0.65
MSH5O43196 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC11□□□□□ -0.65
MSH5O43196 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MSH5O43196 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
MSH5O43196 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
MSH5O43196 ST7-213ENST00000432298 1956 ntTSL 2 BASIC10.99□□□□□ -0.65
MSH5O43196 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
MSH5O43196 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC10.99□□□□□ -0.65
MSH5O43196 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MSH5O43196 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
MSH5O43196 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MSH5O43196 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC10.99□□□□□ -0.65
MSH5O43196 LINC00934-202ENST00000630357 2291 ntTSL 2 BASIC10.99□□□□□ -0.65
MSH5O43196 TNS1-202ENST00000310858 1792 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
MSH5O43196 TBCAP2-201ENST00000416175 326 ntBASIC10.99□□□□□ -0.65
MSH5O43196 LINC02090-201ENST00000419151 400 ntTSL 3 BASIC10.99□□□□□ -0.65
MSH5O43196 BPY2DP-201ENST00000422208 265 ntBASIC10.99□□□□□ -0.65
MSH5O43196 CR391992.1-201ENST00000438601 394 ntBASIC10.99□□□□□ -0.65
MSH5O43196 AL929410.2-201ENST00000451170 189 ntBASIC10.99□□□□□ -0.65
MSH5O43196 RN7SL757P-201ENST00000466709 301 ntBASIC10.99□□□□□ -0.65
MSH5O43196 RN7SL864P-201ENST00000493457 285 ntBASIC10.99□□□□□ -0.65
MSH5O43196 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC10.99□□□□□ -0.65
MSH5O43196 AC091304.5-201ENST00000568969 158 ntBASIC10.99□□□□□ -0.65
MSH5O43196 AC011474.3-201ENST00000587520 250 ntTSL 5 BASIC10.99□□□□□ -0.65
MSH5O43196 AC007785.1-201ENST00000597989 332 ntTSL 5 BASIC10.99□□□□□ -0.65
MSH5O43196 RN7SL3-201ENST00000610674 299 ntBASIC10.99□□□□□ -0.65
MSH5O43196 AL109933.4-201ENST00000612111 157 ntBASIC10.99□□□□□ -0.65
MSH5O43196 MIR6723-201ENST00000621981 89 ntBASIC10.99□□□□□ -0.65
MSH5O43196 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
MSH5O43196 AC008758.3-201ENST00000507003 1829 ntBASIC10.99□□□□□ -0.65
MSH5O43196 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
MSH5O43196 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
MSH5O43196 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
MSH5O43196 SND1-IT1-201ENST00000623342 2481 ntBASIC10.99□□□□□ -0.65
MSH5O43196 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
MSH5O43196 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC10.99□□□□□ -0.65
MSH5O43196 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
MSH5O43196 SAG-201ENST00000409110 1591 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
MSH5O43196 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
MSH5O43196 GULP1-202ENST00000409580 3544 ntAPPRIS P3 TSL 2 BASIC10.98□□□□□ -0.65
MSH5O43196 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MSH5O43196 INTS6-215ENST00000490542 2307 ntTSL 5 BASIC10.98□□□□□ -0.65
MSH5O43196 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC10.98□□□□□ -0.65
MSH5O43196 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC10.98□□□□□ -0.65
MSH5O43196 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MSH5O43196 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
MSH5O43196 AC080128.1-201ENST00000474389 1917 ntBASIC10.98□□□□□ -0.65
MSH5O43196 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MSH5O43196 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
MSH5O43196 AL353132.1-201ENST00000415260 2043 ntBASIC10.98□□□□□ -0.65
MSH5O43196 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MSH5O43196 MIR425-201ENST00000362162 87 ntBASIC10.98□□□□□ -0.65
MSH5O43196 SNORA73A-201ENST00000364938 206 ntBASIC10.98□□□□□ -0.65
MSH5O43196 RNU6-756P-201ENST00000383997 107 ntBASIC10.98□□□□□ -0.65
MSH5O43196 U3.33-201ENST00000408117 204 ntBASIC10.98□□□□□ -0.65
MSH5O43196 AL591704.1-201ENST00000432574 275 ntBASIC10.98□□□□□ -0.65
MSH5O43196 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC10.98□□□□□ -0.65
MSH5O43196 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC10.98□□□□□ -0.65
MSH5O43196 RN7SL403P-201ENST00000481783 305 ntBASIC10.98□□□□□ -0.65
MSH5O43196 PDPN-205ENST00000487038 607 ntTSL 2 BASIC10.98□□□□□ -0.65
MSH5O43196 AC025437.1-201ENST00000523820 346 ntTSL 2 BASIC10.98□□□□□ -0.65
MSH5O43196 AP003174.3-201ENST00000537926 516 ntBASIC10.98□□□□□ -0.65
MSH5O43196 AC024267.2-201ENST00000582737 417 ntBASIC10.98□□□□□ -0.65
MSH5O43196 AC244255.1-201ENST00000613463 398 ntBASIC10.98□□□□□ -0.65
MSH5O43196 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC10.98□□□□□ -0.65
MSH5O43196 SH3BP5-AS1-202ENST00000420195 5570 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
MSH5O43196 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC10.98□□□□□ -0.65
MSH5O43196 IQCH-AS1-203ENST00000559298 5753 ntTSL 5 BASIC10.98□□□□□ -0.65
MSH5O43196 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
MSH5O43196 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MSH5O43196 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MSH5O43196 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
MSH5O43196 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
MSH5O43196 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
MSH5O43196 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MSH5O43196 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
MSH5O43196 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
MSH5O43196 APP-206ENST00000359726 3294 ntTSL 2 BASIC10.97□□□□□ -0.65
MSH5O43196 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
MSH5O43196 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
MSH5O43196 AC007529.1-201ENST00000418574 2178 ntBASIC10.97□□□□□ -0.65
MSH5O43196 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MSH5O43196 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC10.97□□□□□ -0.65
MSH5O43196 TCF4-241ENST00000568740 2628 ntTSL 5 BASIC10.97□□□□□ -0.65
MSH5O43196 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MSH5O43196 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 330.8 ms