Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AL139281.1-201ENST00000422120 335 ntBASIC1.59□□□□□ -2.16
MACF1Q9UPN3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 AL591623.2-201ENST00000449978 222 ntBASIC1.59□□□□□ -2.16
MACF1Q9UPN3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 AL049830.4-201ENST00000555149 351 ntBASIC1.59□□□□□ -2.16
MACF1Q9UPN3 H3F3AP1-201ENST00000559984 334 ntBASIC1.59□□□□□ -2.16
MACF1Q9UPN3 AC009097.3-201ENST00000563557 1018 ntBASIC1.59□□□□□ -2.16
MACF1Q9UPN3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC1.59□□□□□ -2.16
MACF1Q9UPN3 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 VTA1P1-201ENST00000414044 866 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 MYL8P-204ENST00000431574 518 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 RPS3AP6-201ENST00000484430 795 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 RPL23AP92-201ENST00000603609 255 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 RNA5SP175-201ENST00000364275 119 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 SNORA70B-201ENST00000384210 135 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 SNORA74C-2-201ENST00000411179 201 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AC068781.1-201ENST00000488231 618 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AL158827.2-201ENST00000602494 330 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AL691447.3-201ENST00000635020 330 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 CKS1BP6-201ENST00000424932 240 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 NPM1P18-201ENST00000434232 732 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 SERPINA7P1-201ENST00000443077 631 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 FCF1P7-201ENST00000451185 558 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AC012671.1-201ENST00000451912 203 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AC097262.1-201ENST00000452559 548 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AC108729.3-201ENST00000513484 108 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AP003485.2-201ENST00000623636 610 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 DMD-211ENST00000378707 7410 ntTSL 5 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AL357552.1-201ENST00000445254 415 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AC093166.2-201ENST00000455969 1017 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 RPS4XP18-201ENST00000495480 763 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 OSBPL9P2-201ENST00000526582 1228 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AC244258.1-201ENST00000637553 1071 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AL731532.2-201ENST00000623542 1953 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 RNA5SP99-201ENST00000364020 114 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AL136116.1-201ENST00000403591 381 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AC000041.1-201ENST00000439655 175 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 S100A11P1-201ENST00000477525 312 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AC011266.1-201ENST00000624119 3569 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 AL451142.2-201ENST00000429076 2090 ntBASIC1.58□□□□□ -2.16
MACF1Q9UPN3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC1.58□□□□□ -2.16
MACF1Q9UPN3 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms