Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC025260.1-201ENST00000548858 430 ntBASIC4.44□□□□□ -1.7
SPASTQ9UBP0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.44□□□□□ -1.7
SPASTQ9UBP0 OR4U1P-201ENST00000554958 912 ntBASIC4.44□□□□□ -1.7
SPASTQ9UBP0 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SPASTQ9UBP0 AL731537.2-201ENST00000561565 951 ntBASIC4.44□□□□□ -1.7
SPASTQ9UBP0 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.44□□□□□ -1.7
SPASTQ9UBP0 RN7SL176P-201ENST00000580352 264 ntBASIC4.44□□□□□ -1.7
SPASTQ9UBP0 AC003001.2-201ENST00000616294 831 ntBASIC4.44□□□□□ -1.7
SPASTQ9UBP0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SPASTQ9UBP0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SPASTQ9UBP0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SPASTQ9UBP0 EOGT-210ENST00000615922 1931 ntBASIC4.44□□□□□ -1.7
SPASTQ9UBP0 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SPASTQ9UBP0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SPASTQ9UBP0 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SPASTQ9UBP0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SPASTQ9UBP0 RNU1-94P-201ENST00000362627 173 ntBASIC4.43□□□□□ -1.7
SPASTQ9UBP0 RNU1-20P-201ENST00000363314 162 ntBASIC4.43□□□□□ -1.7
SPASTQ9UBP0 HDGFP1-201ENST00000405943 252 ntBASIC4.43□□□□□ -1.7
SPASTQ9UBP0 AL353692.2-201ENST00000407054 335 ntBASIC4.43□□□□□ -1.7
SPASTQ9UBP0 RN7SL98P-201ENST00000462271 300 ntBASIC4.43□□□□□ -1.7
SPASTQ9UBP0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.43□□□□□ -1.7
SPASTQ9UBP0 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.43□□□□□ -1.7
SPASTQ9UBP0 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.43□□□□□ -1.7
SPASTQ9UBP0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.43□□□□□ -1.7
SPASTQ9UBP0 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.43□□□□□ -1.7
SPASTQ9UBP0 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.43□□□□□ -1.7
SPASTQ9UBP0 AP001160.4-201ENST00000596971 382 ntBASIC4.43□□□□□ -1.7
SPASTQ9UBP0 IPO5P1-202ENST00000600039 287 ntBASIC4.43□□□□□ -1.7
SPASTQ9UBP0 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.43□□□□□ -1.7
SPASTQ9UBP0 AC008966.2-201ENST00000606157 453 ntBASIC4.43□□□□□ -1.7
SPASTQ9UBP0 AC026979.4-201ENST00000606555 645 ntBASIC4.43□□□□□ -1.7
SPASTQ9UBP0 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.43□□□□□ -1.7
SPASTQ9UBP0 AC023043.4-201ENST00000612081 449 ntBASIC4.43□□□□□ -1.7
SPASTQ9UBP0 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SPASTQ9UBP0 AP000843.1-201ENST00000624880 701 ntBASIC4.43□□□□□ -1.7
SPASTQ9UBP0 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.43□□□□□ -1.7
SPASTQ9UBP0 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.43□□□□□ -1.7
SPASTQ9UBP0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SPASTQ9UBP0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
SPASTQ9UBP0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SPASTQ9UBP0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.43□□□□□ -1.7
SPASTQ9UBP0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.43□□□□□ -1.7
SPASTQ9UBP0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SPASTQ9UBP0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SPASTQ9UBP0 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SPASTQ9UBP0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 AL356057.1-202ENST00000402263 756 ntBASIC4.42□□□□□ -1.7
SPASTQ9UBP0 AL049737.1-201ENST00000413920 1403 ntBASIC4.42□□□□□ -1.7
SPASTQ9UBP0 TATDN1P1-201ENST00000414123 891 ntBASIC4.42□□□□□ -1.7
SPASTQ9UBP0 AC234782.4-201ENST00000417646 1048 ntBASIC4.42□□□□□ -1.7
SPASTQ9UBP0 AC004975.1-201ENST00000428733 208 ntBASIC4.42□□□□□ -1.7
SPASTQ9UBP0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 RN7SL41P-201ENST00000476144 297 ntBASIC4.42□□□□□ -1.7
SPASTQ9UBP0 RPL30P11-201ENST00000495304 339 ntBASIC4.42□□□□□ -1.7
SPASTQ9UBP0 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 CYCSP28-201ENST00000534284 321 ntBASIC4.42□□□□□ -1.7
SPASTQ9UBP0 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 AC025918.2-201ENST00000558683 763 ntBASIC4.42□□□□□ -1.7
SPASTQ9UBP0 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 AC015912.2-201ENST00000571053 181 ntBASIC4.42□□□□□ -1.7
SPASTQ9UBP0 MIR3138-201ENST00000585238 82 ntBASIC4.42□□□□□ -1.7
SPASTQ9UBP0 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 PCNAP1-202ENST00000595299 752 ntBASIC4.42□□□□□ -1.7
SPASTQ9UBP0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 AC114781.5-201ENST00000615297 108 ntBASIC4.42□□□□□ -1.7
SPASTQ9UBP0 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 CDRT1-208ENST00000630868 794 ntBASIC4.42□□□□□ -1.7
SPASTQ9UBP0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.42□□□□□ -1.7
SPASTQ9UBP0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SPASTQ9UBP0 MTND4P21-201ENST00000453886 1357 ntBASIC4.41□□□□□ -1.7
SPASTQ9UBP0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SPASTQ9UBP0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SPASTQ9UBP0 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.41□□□□□ -1.7
SPASTQ9UBP0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SPASTQ9UBP0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SPASTQ9UBP0 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.41□□□□□ -1.7
SPASTQ9UBP0 OR5P1P-201ENST00000299512 925 ntBASIC4.41□□□□□ -1.7
SPASTQ9UBP0 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SPASTQ9UBP0 RNU6-98P-201ENST00000384173 107 ntBASIC4.41□□□□□ -1.7
SPASTQ9UBP0 HSPD1P16-201ENST00000402302 394 ntBASIC4.41□□□□□ -1.7
SPASTQ9UBP0 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.41□□□□□ -1.7
SPASTQ9UBP0 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.41□□□□□ -1.7
SPASTQ9UBP0 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.41□□□□□ -1.7
SPASTQ9UBP0 RPL7P33-201ENST00000444159 742 ntBASIC4.41□□□□□ -1.7
SPASTQ9UBP0 TPTE2P6-202ENST00000445572 1007 ntBASIC4.41□□□□□ -1.7
SPASTQ9UBP0 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms