Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC009220.2-201ENST00000489759 1751 ntBASIC8.63□□□□□ -1.03
RTN4Q9NQC3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 RNA5SP223-201ENST00000365174 120 ntBASIC8.63□□□□□ -1.03
RTN4Q9NQC3 BPIFA1-202ENST00000375413 1026 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 RACK1-201ENST00000376817 965 ntTSL 5 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 RNU6-1297P-201ENST00000384415 104 ntBASIC8.63□□□□□ -1.03
RTN4Q9NQC3 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 ENTPD3-AS1-201ENST00000420850 791 ntTSL 2 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 PRPS1P2-201ENST00000430496 937 ntBASIC8.63□□□□□ -1.03
RTN4Q9NQC3 AL122003.1-201ENST00000435206 784 ntBASIC8.63□□□□□ -1.03
RTN4Q9NQC3 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 SNORD19B-201ENST00000459623 84 ntBASIC8.63□□□□□ -1.03
RTN4Q9NQC3 PFN1P6-201ENST00000476786 399 ntBASIC8.63□□□□□ -1.03
RTN4Q9NQC3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 SNRPCP8-201ENST00000514820 211 ntBASIC8.63□□□□□ -1.03
RTN4Q9NQC3 RN7SKP197-201ENST00000517077 297 ntBASIC8.63□□□□□ -1.03
RTN4Q9NQC3 RPS20-204ENST00000519606 424 ntTSL 3 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 ATP6V1G1P2-201ENST00000522436 346 ntBASIC8.63□□□□□ -1.03
RTN4Q9NQC3 AP005597.2-201ENST00000526238 341 ntBASIC8.63□□□□□ -1.03
RTN4Q9NQC3 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 AC092121.1-201ENST00000569452 202 ntBASIC8.63□□□□□ -1.03
RTN4Q9NQC3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 AP001330.4-201ENST00000604350 154 ntBASIC8.63□□□□□ -1.03
RTN4Q9NQC3 AC010680.4-201ENST00000605334 543 ntBASIC8.63□□□□□ -1.03
RTN4Q9NQC3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 RNVU1-19-201ENST00000613023 167 ntBASIC8.63□□□□□ -1.03
RTN4Q9NQC3 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 AL356095.2-201ENST00000624025 457 ntBASIC8.63□□□□□ -1.03
RTN4Q9NQC3 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 AC105114.1-201ENST00000624795 1862 ntBASIC8.63□□□□□ -1.03
RTN4Q9NQC3 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC8.63□□□□□ -1.03
RTN4Q9NQC3 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 ARNTL2-201ENST00000261178 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 RN7SKP224-201ENST00000364140 325 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 TINAG-202ENST00000370864 692 ntTSL 2 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 RNU6-946P-201ENST00000383878 107 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 MIR135A2-201ENST00000384854 100 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 EIF4E2P1-201ENST00000393781 255 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 AC110754.1-201ENST00000399740 601 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 AL359715.1-201ENST00000404330 555 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 TMSB10P1-201ENST00000415070 132 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 AL139396.1-201ENST00000421137 167 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 AC009518.3-201ENST00000438972 253 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 AL592043.2-201ENST00000454146 743 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 AC010631.1-201ENST00000474150 156 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 MYADML-203ENST00000491596 951 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 GM2AP2-201ENST00000491764 562 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 AL049874.2-201ENST00000492636 288 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 AC008429.2-201ENST00000523057 864 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 AP000763.2-201ENST00000540641 163 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 RN7SL670P-201ENST00000577235 294 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 AC004839.1-201ENST00000610269 501 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 SLC20A1P2-201ENST00000618036 966 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 C2orf27A-204ENST00000623058 969 ntBASIC8.62□□□□□ -1.03
RTN4Q9NQC3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC8.62□□□□□ -1.03
RTN4Q9NQC3 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
RTN4Q9NQC3 AL161725.1-201ENST00000591577 1351 ntTSL 5 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms