Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC112503.1-201ENST00000608436 391 ntBASIC4.5□□□□□ -1.69
SIX2Q9NPC8 AL121652.1-201ENST00000608851 448 ntBASIC4.5□□□□□ -1.69
SIX2Q9NPC8 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 AC013437.2-201ENST00000639587 677 ntBASIC4.5□□□□□ -1.69
SIX2Q9NPC8 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 AC106754.1-201ENST00000562632 1513 ntBASIC4.5□□□□□ -1.69
SIX2Q9NPC8 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 IGKV7-3-201ENST00000357453 298 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 SNORD74.4-201ENST00000364129 80 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 RNA5SP509-201ENST00000364577 119 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 RNU6-468P-201ENST00000384003 109 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 HMGB3P19-201ENST00000403971 560 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 RNU2-17P-201ENST00000410290 190 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 AC106883.1-201ENST00000418805 562 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 RPA2P2-201ENST00000419698 796 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 AL592293.2-201ENST00000422292 996 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 AC093084.1-201ENST00000424233 687 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 FO393414.1-201ENST00000428697 1184 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 VDAC1P6-201ENST00000430062 855 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 NDUFA5P10-201ENST00000432147 357 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 ELOCP18-201ENST00000434209 337 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 AC010469.1-201ENST00000463864 576 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 AF213884.1-201ENST00000488102 463 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 PRELID3BP6-201ENST00000503839 571 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 KRT19P6-201ENST00000510983 209 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 AC133963.2-201ENST00000513686 578 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 AC105233.3-201ENST00000531125 744 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 AC022655.2-201ENST00000577280 318 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 MIR4330-201ENST00000579077 105 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 AC007448.1-201ENST00000582714 234 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 AC068020.1-201ENST00000594215 661 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 AC011492.1-201ENST00000600023 315 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 AC008638.3-201ENST00000603341 463 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 AC063944.3-201ENST00000609969 533 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 RN7SL722P-201ENST00000617780 284 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 RN7SL565P-201ENST00000618246 284 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 AL121890.3-201ENST00000618494 516 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 AC126544.2-201ENST00000625174 749 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SIX2Q9NPC8 SPATA2P1-201ENST00000431223 2055 ntBASIC4.49□□□□□ -1.69
SIX2Q9NPC8 AC097504.1-201ENST00000515103 2415 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 MARK2P15-201ENST00000432204 2186 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 ZNF962P-201ENST00000443465 3140 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 LINC01109-201ENST00000603837 3081 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 VPS35P1-201ENST00000563400 1518 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 AC092162.3-201ENST00000624511 1624 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 RNU6-481P-201ENST00000384194 107 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 HMGB1P10-201ENST00000395823 563 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 AL355615.1-201ENST00000406187 641 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 RNA5SP306-201ENST00000411087 107 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 MTCO1P43-201ENST00000431831 488 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 AC044797.1-201ENST00000445744 679 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 HMGB1P26-201ENST00000452520 628 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 RNA5SP246-201ENST00000458909 119 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 RN7SL738P-201ENST00000470264 297 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 UBE2V1P12-201ENST00000503954 474 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 AC069306.1-201ENST00000507006 843 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 KCTD9P2-201ENST00000512203 1013 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 MTCYBP19-201ENST00000517463 1124 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 AC087894.1-201ENST00000538359 518 ntBASIC4.48□□□□□ -1.69
SIX2Q9NPC8 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SIX2Q9NPC8 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms