Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC018552.3-201ENST00000567416 561 ntBASIC3.71□□□□□ -1.82
RSPO3Q9BXY4 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
RSPO3Q9BXY4 AL390816.3-201ENST00000604527 1066 ntBASIC3.71□□□□□ -1.82
RSPO3Q9BXY4 AC010857.1-201ENST00000606398 594 ntBASIC3.71□□□□□ -1.82
RSPO3Q9BXY4 AC017076.1-201ENST00000607613 578 ntBASIC3.71□□□□□ -1.82
RSPO3Q9BXY4 AP000255.1-201ENST00000610276 676 ntBASIC3.71□□□□□ -1.82
RSPO3Q9BXY4 NF1P10-201ENST00000613227 742 ntBASIC3.71□□□□□ -1.82
RSPO3Q9BXY4 AC026368.1-201ENST00000614934 690 ntBASIC3.71□□□□□ -1.82
RSPO3Q9BXY4 AL445567.2-201ENST00000618935 498 ntBASIC3.71□□□□□ -1.82
RSPO3Q9BXY4 AC034229.5-201ENST00000624258 185 ntBASIC3.71□□□□□ -1.82
RSPO3Q9BXY4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
RSPO3Q9BXY4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
RSPO3Q9BXY4 AC093311.1-201ENST00000506586 2021 ntBASIC3.71□□□□□ -1.82
RSPO3Q9BXY4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RSPO3Q9BXY4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RSPO3Q9BXY4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RSPO3Q9BXY4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.71□□□□□ -1.82
RSPO3Q9BXY4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RSPO3Q9BXY4 PNPT1P2-201ENST00000456768 2050 ntBASIC3.71□□□□□ -1.82
RSPO3Q9BXY4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 AL592437.2-201ENST00000421655 2434 ntBASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 RNA5SP399-201ENST00000364003 117 ntBASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 RNA5SP479-201ENST00000364858 117 ntBASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 AC240504.1-201ENST00000395709 845 ntBASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 SNORA81-201ENST00000408493 178 ntBASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 TPT1P2-201ENST00000413105 503 ntBASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 MTND4LP13-201ENST00000425022 298 ntBASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 KCTD10P1-201ENST00000434203 625 ntBASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 KCTD9P3-201ENST00000434597 1169 ntBASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 AC083863.1-201ENST00000438811 231 ntBASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 ACTR3P2-201ENST00000439585 1257 ntBASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 AC092691.2-201ENST00000461787 803 ntBASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 RPL23AP2-201ENST00000471227 466 ntBASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 MIR1254-2-201ENST00000579553 63 ntBASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 AC110743.1-201ENST00000584870 478 ntBASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 AC020658.4-201ENST00000613987 684 ntBASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RSPO3Q9BXY4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 SNORD35B-201ENST00000363660 87 ntBASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 SNORA48.7-201ENST00000391302 135 ntBASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 HMGB3P19-201ENST00000403971 560 ntBASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 COX6CP15-201ENST00000426313 211 ntBASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 FABP3P2-201ENST00000453169 399 ntBASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 AC105137.1-201ENST00000484355 562 ntBASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 RNU6-551P-201ENST00000516661 103 ntBASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 AP003730.1-201ENST00000524605 285 ntBASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 GNRHR2P1-201ENST00000555315 631 ntBASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 AL121839.1-201ENST00000556233 1185 ntBASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 HMGB1P50-201ENST00000605814 607 ntBASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 MIR6868-201ENST00000611215 58 ntBASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 AC022960.2-201ENST00000616300 666 ntBASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 MIR8059-201ENST00000620427 81 ntBASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 MFSD8-242ENST00000641690 4199 ntBASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 AC010300.1-201ENST00000600671 5134 ntBASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 CYP1D1P-201ENST00000416662 1433 ntBASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.69□□□□□ -1.82
RSPO3Q9BXY4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.68□□□□□ -1.82
RSPO3Q9BXY4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms