Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 AC119674.1-212ENST00000641155 993 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 HCG18-244ENST00000602516 2890 ntBASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL25A1Q9BXS0 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 AC013488.1-201ENST00000526618 1838 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 AL360271.1-201ENST00000395679 510 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 RPS20P2-201ENST00000402520 389 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 MIR1305-201ENST00000408300 86 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 RN7SKP158-201ENST00000410453 326 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 RN7SKP281-201ENST00000410472 352 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 RN7SKP296-201ENST00000411185 341 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 BMS1P17-202ENST00000416720 316 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 HMGB3P10-201ENST00000434734 572 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 AL353093.1-201ENST00000441292 436 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 SLC31A1P1-201ENST00000451221 567 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 MTND3P16-201ENST00000452205 344 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 RNU7-63P-201ENST00000459054 62 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 RPL7P22-201ENST00000466005 733 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 AC008571.1-201ENST00000467232 300 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 AC017015.1-201ENST00000477387 286 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 RN7SL481P-201ENST00000477764 299 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 AC083904.1-201ENST00000487828 231 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 Y_RNA.665-201ENST00000516177 98 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 RNU2-53P-201ENST00000516257 147 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 WBP1LP3-201ENST00000523033 208 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 OR5D2P-201ENST00000524390 911 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 AL121579.2-201ENST00000555466 590 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 MIR3167-201ENST00000579623 85 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 MIR4480-201ENST00000582492 71 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 MIR5690-201ENST00000583739 73 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 AC104687.2-201ENST00000604442 342 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 AC011626.1-201ENST00000604710 562 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 RPL12P48-201ENST00000605620 304 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 AL117339.4-201ENST00000608335 7063 ntBASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
COL25A1Q9BXS0 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.36
COL25A1Q9BXS0 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC6.52□□□□□ -1.36
COL25A1Q9BXS0 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 DDX18P6-201ENST00000450119 1997 ntBASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 Y_RNA.396-201ENST00000383949 103 ntBASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 Y_RNA.512-201ENST00000384518 102 ntBASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 RNU4-26P-201ENST00000410270 107 ntBASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 AC245096.1-201ENST00000413104 546 ntBASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 AC080125.1-201ENST00000414888 684 ntBASIC6.52□□□□□ -1.37
COL25A1Q9BXS0 SLC35E1P1-201ENST00000419313 864 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms