Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB40AQ8WXH6 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AC021242.1-201ENST00000507315 2035 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AC063976.2-201ENST00000425667 3556 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 SUGT1P1-201ENST00000379514 476 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 RNU1-77P-201ENST00000390868 162 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 MTCO3P31-201ENST00000405526 789 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AL136133.1-201ENST00000413694 376 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 FCF1P2-201ENST00000415284 583 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AC008280.1-201ENST00000418851 412 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 SLC35E1P1-201ENST00000419313 864 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AC012519.1-201ENST00000424588 610 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 RPP40P1-201ENST00000426762 456 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 SKP1P3-201ENST00000429280 487 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AL513175.1-201ENST00000431492 780 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 RPS6P15-201ENST00000431996 751 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 ATP5F1P1-201ENST00000433775 569 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AC105402.2-201ENST00000438503 358 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AL450263.2-201ENST00000439400 589 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 CYCSP34-201ENST00000458172 304 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 GYG1P1-201ENST00000460864 698 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 WBP1LP4-201ENST00000505043 344 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 PDCL2P2-201ENST00000533651 189 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 BLZF2P-201ENST00000553776 1130 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AC090515.3-201ENST00000560431 315 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 DUXAP3-201ENST00000603616 594 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AC009220.3-201ENST00000604318 586 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AC005252.1-201ENST00000604518 1063 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AL512329.2-201ENST00000607350 548 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AC108359.1-201ENST00000616451 1211 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 MIR8069-1-201ENST00000616627 86 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 MIR8069-2-201ENST00000621412 86 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AC017037.3-201ENST00000625016 472 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 AC074101.1-201ENST00000637861 241 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 SCN1A-220ENST00000641603 12506 ntBASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
RAB40AQ8WXH6 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAB40AQ8WXH6 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.52□□□□□ -1.69
RAB40AQ8WXH6 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.52□□□□□ -1.69
RAB40AQ8WXH6 AC120338.1-201ENST00000625074 1541 ntBASIC4.52□□□□□ -1.69
RAB40AQ8WXH6 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAB40AQ8WXH6 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RAB40AQ8WXH6 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.52□□□□□ -1.69
RAB40AQ8WXH6 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RAB40AQ8WXH6 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAB40AQ8WXH6 AC090971.4-201ENST00000560291 1800 ntBASIC4.52□□□□□ -1.69
RAB40AQ8WXH6 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RAB40AQ8WXH6 SNORD113-6-201ENST00000363345 75 ntBASIC4.52□□□□□ -1.69
RAB40AQ8WXH6 RNA5SP335-201ENST00000363817 110 ntBASIC4.52□□□□□ -1.69
RAB40AQ8WXH6 RN7SKP224-201ENST00000364140 325 ntBASIC4.52□□□□□ -1.69
RAB40AQ8WXH6 LRRC37BP1-201ENST00000398851 714 ntBASIC4.52□□□□□ -1.69
RAB40AQ8WXH6 DSTNP4-201ENST00000399472 474 ntBASIC4.52□□□□□ -1.69
RAB40AQ8WXH6 AL049545.1-201ENST00000401856 572 ntBASIC4.52□□□□□ -1.69
RAB40AQ8WXH6 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RAB40AQ8WXH6 AL390774.1-201ENST00000411924 246 ntBASIC4.52□□□□□ -1.69
RAB40AQ8WXH6 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.52□□□□□ -1.69
RAB40AQ8WXH6 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms