Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AP001922.4-201ENST00000526967 290 ntBASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 OR8I1P-201ENST00000529291 931 ntBASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 ATP5F1P7-201ENST00000567330 760 ntBASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 AC103792.1-201ENST00000603591 919 ntBASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 AL160237.3-201ENST00000604114 1013 ntBASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 AL049539.1-201ENST00000611964 459 ntBASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 AC067931.1-201ENST00000624190 671 ntBASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 LINC01808-202ENST00000641680 1116 ntBASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SLC44A1Q8WWI5 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 NXPH1-205ENST00000602349 1953 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 RNU6-543P-201ENST00000362576 108 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 RNA5SP28-201ENST00000363841 119 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 AC019155.1-201ENST00000382242 574 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 AL603865.2-201ENST00000401679 213 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 RPL7P27-201ENST00000403775 720 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 AL121834.1-202ENST00000404494 277 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 AL078604.1-201ENST00000404609 466 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 VN1R8P-201ENST00000407739 893 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 GSTM3P2-201ENST00000412746 530 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 MTATP6P20-201ENST00000414147 562 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 RBMY2KP-201ENST00000418221 992 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 CENPIP1-201ENST00000425713 902 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 DYNLL1P7-201ENST00000429273 258 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 RPL7P29-201ENST00000437151 728 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 AL772161.1-201ENST00000439130 476 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 PTMAP3-201ENST00000447474 330 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 OR52J1P-201ENST00000450596 932 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 HIGD1AP8-201ENST00000453927 274 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 SCARNA10-201ENST00000459255 330 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 RPS23P1-201ENST00000491662 432 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 HMGB3P13-201ENST00000511263 607 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 AC015795.1-201ENST00000513669 327 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 AC108471.1-201ENST00000513977 287 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 OR8G5-201ENST00000524943 1041 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 OR5D15P-201ENST00000531671 942 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 AC095057.3-201ENST00000567102 1157 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 AP001784.1-201ENST00000624107 428 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 AC139713.2-210ENST00000641741 992 ntBASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC44A1Q8WWI5 INTS6P1-201ENST00000504674 2530 ntBASIC4.56□□□□□ -1.68
SLC44A1Q8WWI5 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.56□□□□□ -1.68
SLC44A1Q8WWI5 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A1Q8WWI5 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
SLC44A1Q8WWI5 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A1Q8WWI5 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC44A1Q8WWI5 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A1Q8WWI5 AC067945.1-201ENST00000342609 618 ntBASIC4.56□□□□□ -1.68
SLC44A1Q8WWI5 SNORA62.2-201ENST00000364672 152 ntBASIC4.56□□□□□ -1.68
SLC44A1Q8WWI5 AL139128.1-201ENST00000413921 941 ntBASIC4.56□□□□□ -1.68
SLC44A1Q8WWI5 ATG4AP1-201ENST00000416893 538 ntBASIC4.56□□□□□ -1.68
SLC44A1Q8WWI5 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC44A1Q8WWI5 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.56□□□□□ -1.68
SLC44A1Q8WWI5 RAD23BP1-201ENST00000421404 1227 ntBASIC4.56□□□□□ -1.68
SLC44A1Q8WWI5 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms