Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 MIR4506-201ENST00000584693 77 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC020910.3-201ENST00000603701 874 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AL160290.3-201ENST00000604869 165 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC007497.1-201ENST00000610421 561 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 MIR6726-201ENST00000613751 61 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC022079.2-201ENST00000619739 566 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 MIR6837-201ENST00000620884 64 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC096656.1-201ENST00000623826 1364 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 NCLP2-201ENST00000416078 1462 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AL356274.2-201ENST00000624379 3752 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AC116096.1-201ENST00000566804 2314 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 ATP5F1P4-201ENST00000397288 746 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AC009804.1-201ENST00000400949 179 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AP000357.1-201ENST00000409926 1165 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AMMECR1LP1-201ENST00000415152 841 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AL590139.1-201ENST00000416267 400 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 RPL17P36-201ENST00000420302 549 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 GOT2P5-201ENST00000433995 546 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 CYCSP12-201ENST00000437729 300 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 VN1R48P-201ENST00000448149 1036 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AC146507.1-201ENST00000468335 354 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AC068724.1-201ENST00000487100 792 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AC006483.1-201ENST00000487308 313 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 RPS23P1-201ENST00000491662 432 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AC110775.1-201ENST00000513721 462 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 TRAPPC2P2-201ENST00000517589 409 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AC006518.1-201ENST00000541449 943 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AC092747.2-201ENST00000545069 983 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 EIF4A2P1-201ENST00000587313 1063 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AL133393.1-201ENST00000603277 287 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 FO393422.1-201ENST00000603908 708 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 SUGT1P3-202ENST00000604259 383 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AL512624.1-201ENST00000613638 469 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AL359513.1-201ENST00000614364 557 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 PDCD6IPP1-202ENST00000622242 1064 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 U3.53-201ENST00000628922 216 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
SPTSSBQ8NFR3 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC2.17□□□□□ -2.06
SPTSSBQ8NFR3 MTND5P3-201ENST00000438536 1800 ntBASIC2.17□□□□□ -2.06
SPTSSBQ8NFR3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SPTSSBQ8NFR3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
SPTSSBQ8NFR3 AC092435.3-201ENST00000565538 3654 ntBASIC2.17□□□□□ -2.06
SPTSSBQ8NFR3 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SPTSSBQ8NFR3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC2.17□□□□□ -2.06
SPTSSBQ8NFR3 SNORA74A-201ENST00000364089 198 ntBASIC2.17□□□□□ -2.06
SPTSSBQ8NFR3 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
SPTSSBQ8NFR3 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC2.17□□□□□ -2.06
SPTSSBQ8NFR3 MIR191-201ENST00000384873 92 ntBASIC2.17□□□□□ -2.06
SPTSSBQ8NFR3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SPTSSBQ8NFR3 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms