Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 Y_RNA.553-201ENST00000384670 102 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 ATP5HP3-201ENST00000396994 486 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 RPL23AP59-201ENST00000399415 461 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 RPS3AP23-201ENST00000401762 784 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 RN7SKP100-201ENST00000411258 284 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 ELOCP17-201ENST00000414751 326 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AC093899.1-201ENST00000457984 376 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AC010326.1-201ENST00000462726 602 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 RN7SL189P-201ENST00000468631 289 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AC010350.1-201ENST00000504908 231 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AC021146.8-201ENST00000507455 733 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 RN7SKP92-201ENST00000517266 244 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 NDUFA5P2-201ENST00000519723 344 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 MTCYBP41-201ENST00000528913 1123 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 EIF1P4-201ENST00000572664 335 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 MIR4999-201ENST00000585029 91 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 VN1R82P-201ENST00000601481 356 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AC073648.5-201ENST00000603502 305 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AC092794.1-201ENST00000612734 582 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AC073534.2-201ENST00000620377 381 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AL359757.1-201ENST00000623176 255 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 TCP11X1-202ENST00000622971 1372 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AC095050.2-201ENST00000510748 1458 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 PROS2P-201ENST00000474651 1951 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AC083899.1-201ENST00000454465 3819 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 TTC39DP-201ENST00000416781 1688 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 OR56B2P-201ENST00000317102 954 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 Y_RNA.3-201ENST00000362331 103 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 MIR298-201ENST00000401212 88 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 RNU6-757P-201ENST00000410334 100 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AF186996.5-201ENST00000418098 904 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AL354941.1-201ENST00000438600 464 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AC023512.1-201ENST00000444513 499 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 HMGB1P48-201ENST00000446155 598 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AL354714.3-201ENST00000447284 493 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 OR1H1P-201ENST00000448731 937 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 IGHV5-78-201ENST00000450948 295 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 CDC42P1-201ENST00000456658 548 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AC022133.1-201ENST00000490961 571 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AC069304.1-201ENST00000491593 704 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AC092045.1-201ENST00000495716 1231 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms