Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 AC068790.2-201ENST00000602601 557 ntBASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 NANOGP3-201ENST00000605855 286 ntBASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 AL445222.1-201ENST00000607259 628 ntBASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 AC012360.2-201ENST00000609349 391 ntBASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 AC126915.2-201ENST00000610957 190 ntBASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 AL118522.2-201ENST00000616045 615 ntBASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 SAMMSON-210ENST00000641260 1308 ntBASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 AC005224.3-201ENST00000584683 2140 ntBASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.71□□□□□ -1.5
SYNPOQ8N3V7 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AC117529.2-201ENST00000512159 2068 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 MTCO1P23-201ENST00000415223 1526 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AC133552.1-201ENST00000569988 4007 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 RNA5SP305-201ENST00000362665 119 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 RNU1-77P-201ENST00000390868 162 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 RPL37P18-201ENST00000411602 243 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 ATG4AP1-201ENST00000416893 538 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 VN1R21P-201ENST00000426703 765 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 NPM1P18-201ENST00000434232 732 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AL353597.2-202ENST00000434901 373 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 RPL23AP16-201ENST00000441715 421 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 MTCO1P19-201ENST00000443487 500 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 RPS26P56-201ENST00000444468 240 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 TRGVB-201ENST00000453257 471 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 snoU13.7-201ENST00000459220 104 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 NDUFB5P1-201ENST00000508134 564 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AC110792.2-201ENST00000510278 224 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 MTND4LP31-201ENST00000514859 294 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AP000676.2-201ENST00000529711 301 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 ZNF705CP-201ENST00000530515 889 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AL389895.1-201ENST00000554127 252 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 PCMTD1P2-201ENST00000565017 355 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 MIR4311-201ENST00000580794 100 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 MAGOH2P-202ENST00000584384 429 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AC087763.1-201ENST00000603391 286 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AC000068.2-201ENST00000608816 460 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AL049539.1-201ENST00000611964 459 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AC092656.1-203ENST00000624134 423 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AL355834.1-201ENST00000556602 3965 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AP004607.3-201ENST00000530354 3915 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 AC131971.1-201ENST00000332881 1482 ntBASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNPOQ8N3V7 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms