Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC005261.2-201ENST00000593427 4258 ntBASIC5.11□□□□□ -1.59
VRK3Q8IV63 AC005539.1-201ENST00000443768 1479 ntBASIC5.11□□□□□ -1.59
VRK3Q8IV63 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VRK3Q8IV63 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
VRK3Q8IV63 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRK3Q8IV63 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VRK3Q8IV63 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRK3Q8IV63 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VRK3Q8IV63 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VRK3Q8IV63 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VRK3Q8IV63 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VRK3Q8IV63 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VRK3Q8IV63 AC006210.2-201ENST00000367074 1545 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VRK3Q8IV63 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 SNORA5.1-201ENST00000384275 131 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 SNORA48.4-201ENST00000391089 134 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 LINC01347-201ENST00000417964 355 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 GNG5P5-201ENST00000420444 220 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 AL355433.1-201ENST00000422804 300 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 ISCA1P1-201ENST00000426679 387 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 USP9YP31-201ENST00000431405 881 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VRK3Q8IV63 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VRK3Q8IV63 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 AL137845.2-201ENST00000444292 988 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 AC023512.1-201ENST00000444513 499 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 FAR2P1-206ENST00000449736 709 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VRK3Q8IV63 AC009127.1-201ENST00000467090 155 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 RN7SL222P-201ENST00000476452 299 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 AC008953.1-201ENST00000497334 318 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 AC093281.2-201ENST00000510153 597 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 AC016559.2-201ENST00000510759 359 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 AC079395.1-201ENST00000510981 262 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 HMGB3P13-201ENST00000511263 607 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 AC010587.2-201ENST00000511727 448 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VRK3Q8IV63 AC012400.1-201ENST00000518452 381 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 GTF2IP11-201ENST00000526931 420 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VRK3Q8IV63 HSPA8P14-201ENST00000552265 1805 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 ZNF519P2-201ENST00000557032 169 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 AL022394.1-201ENST00000606979 292 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 AC090517.2-201ENST00000614966 680 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 MIR6826-201ENST00000617808 98 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VRK3Q8IV63 RPL23AP61-201ENST00000623642 466 ntBASIC5.1□□□□□ -1.59
VRK3Q8IV63 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VRK3Q8IV63 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VRK3Q8IV63 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
VRK3Q8IV63 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VRK3Q8IV63 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VRK3Q8IV63 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VRK3Q8IV63 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VRK3Q8IV63 VN2R3P-201ENST00000422626 1412 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
VRK3Q8IV63 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VRK3Q8IV63 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VRK3Q8IV63 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VRK3Q8IV63 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
VRK3Q8IV63 RNU1-74P-201ENST00000384108 171 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VRK3Q8IV63 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 CEACAMP8-201ENST00000413902 580 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.09□□□□□ -1.59
VRK3Q8IV63 BX510359.3-201ENST00000422168 306 ntBASIC5.09□□□□□ -1.59
VRK3Q8IV63 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms