Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF135Q8IUD6 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF135Q8IUD6 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF135Q8IUD6 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC6.93□□□□□ -1.3
RNF135Q8IUD6 AC024884.1-201ENST00000620583 399 ntBASIC6.93□□□□□ -1.3
RNF135Q8IUD6 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF135Q8IUD6 AL049780.3-201ENST00000624612 1583 ntBASIC6.93□□□□□ -1.3
RNF135Q8IUD6 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF135Q8IUD6 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
RNF135Q8IUD6 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.93□□□□□ -1.3
RNF135Q8IUD6 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF135Q8IUD6 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.93□□□□□ -1.3
RNF135Q8IUD6 AC005034.3-201ENST00000604845 1747 ntBASIC6.93□□□□□ -1.3
RNF135Q8IUD6 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
RNF135Q8IUD6 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
RNF135Q8IUD6 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AKAP17BP-201ENST00000431706 2719 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 RACGAP1P-201ENST00000550663 1879 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 Y_RNA.145-201ENST00000363527 102 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 RNU6-510P-201ENST00000391239 108 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AL591212.2-201ENST00000433923 257 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AC024082.2-201ENST00000434771 238 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AL627308.1-201ENST00000435693 821 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 GAPDHP48-201ENST00000436626 961 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AC130509.1-201ENST00000464158 433 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AC104563.1-201ENST00000476147 376 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AP001025.2-201ENST00000490908 477 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AC034222.1-201ENST00000494052 532 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 RPS4XP18-201ENST00000495480 763 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AC010587.1-201ENST00000505809 469 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 GAPDHP56-201ENST00000506031 988 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 MIR3171-201ENST00000584270 74 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AC010525.2-201ENST00000590920 195 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AC113139.1-201ENST00000605049 239 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AC121334.2-201ENST00000605387 271 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 C2orf27A-204ENST00000623058 969 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 TTK-211ENST00000627129 240 ntTSL 5 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 SNORA16A-202ENST00000628458 135 ntBASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RNF135Q8IUD6 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF135Q8IUD6 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms