Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.63□□□□□ -1.99
CSMD3Q7Z407 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 ZNF736P2Y-201ENST00000416040 1279 ntBASIC2.62□□□□□ -1.99
CSMD3Q7Z407 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 AP001992.1-205ENST00000462248 379 ntBASIC2.62□□□□□ -1.99
CSMD3Q7Z407 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 AC084759.1-201ENST00000561168 290 ntBASIC2.62□□□□□ -1.99
CSMD3Q7Z407 OTUD4P1-201ENST00000237841 3067 ntBASIC2.62□□□□□ -1.99
CSMD3Q7Z407 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 HSPA8P17-201ENST00000427029 1382 ntBASIC2.62□□□□□ -1.99
CSMD3Q7Z407 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 AC080014.1-201ENST00000496877 1201 ntBASIC2.62□□□□□ -1.99
CSMD3Q7Z407 RPL7L1P13-201ENST00000511702 739 ntBASIC2.62□□□□□ -1.99
CSMD3Q7Z407 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 AC009229.4-201ENST00000623854 1947 ntBASIC2.62□□□□□ -1.99
CSMD3Q7Z407 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 AC119744.1-201ENST00000454746 1715 ntBASIC2.62□□□□□ -1.99
CSMD3Q7Z407 ANKRD20A10P-201ENST00000457591 1515 ntBASIC2.62□□□□□ -1.99
CSMD3Q7Z407 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 RNA5SP126-201ENST00000365092 109 ntBASIC2.62□□□□□ -1.99
CSMD3Q7Z407 MIR199A2-201ENST00000385289 110 ntBASIC2.62□□□□□ -1.99
CSMD3Q7Z407 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC2.62□□□□□ -1.99
CSMD3Q7Z407 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC2.62□□□□□ -1.99
CSMD3Q7Z407 AC009303.3-201ENST00000591103 736 ntBASIC2.62□□□□□ -1.99
CSMD3Q7Z407 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.62□□□□□ -1.99
CSMD3Q7Z407 AC093849.1-201ENST00000563631 2209 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 AC090337.1-201ENST00000579651 2074 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 RNA5SP51-201ENST00000364750 119 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 AL358178.1-201ENST00000407698 397 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 USP9YP36-201ENST00000424581 829 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 HMGN2P27-201ENST00000427352 270 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 USP9YP31-201ENST00000431405 881 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 AL831737.1-201ENST00000441288 271 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 HMGN1P11-201ENST00000508668 303 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 AC009852.2-201ENST00000567898 485 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 AC006023.1-201ENST00000603944 259 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 AC095038.2-201ENST00000621464 1070 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 MTCO1P24-201ENST00000515438 1558 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 AL365440.1-201ENST00000436135 2167 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 SNORD35B-201ENST00000363660 87 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 NPM1P37-201ENST00000403105 874 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 PGBD4P8-201ENST00000412993 562 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 UBTFL3-201ENST00000418934 1024 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 Z97055.1-201ENST00000419730 712 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 RPL26P28-201ENST00000451325 435 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 CYCSP35-201ENST00000451978 304 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 S100A11P2-201ENST00000467589 312 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 UBTFL6-201ENST00000477929 1024 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 LSM3P2-201ENST00000551246 273 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 MIR4472-2-201ENST00000582069 67 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 AL390816.3-201ENST00000604527 1066 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 AL353743.1-202ENST00000431724 1695 ntBASIC2.61□□□□□ -1.99
CSMD3Q7Z407 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms