Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 RNU1-32P-201ENST00000363937 159 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 RNU6-549P-201ENST00000384433 107 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 RNU6-925P-201ENST00000384629 104 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 RPS24P12-201ENST00000402084 394 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AP000580.1-201ENST00000404439 358 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 U3.35-201ENST00000408405 208 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AC114814.2-201ENST00000419195 485 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 UBE2V1P5-201ENST00000440070 405 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 H2AFZP5-201ENST00000446960 382 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AC108463.1-201ENST00000450258 347 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AC079168.2-201ENST00000453977 416 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 DEFB109F-201ENST00000491870 277 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AC113430.1-201ENST00000506872 718 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AC119751.4-201ENST00000507498 357 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 FKBP1BP1-201ENST00000553366 325 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AC023825.1-201ENST00000566704 1030 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 CYCSP40-201ENST00000575927 294 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 MIR4512-201ENST00000583257 77 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AC008745.1-201ENST00000604064 271 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AC234782.5-201ENST00000617723 324 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AC108751.5-201ENST00000492880 1336 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 DDX18P5-201ENST00000534547 1306 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AL627171.1-201ENST00000618845 1308 ntBASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SNX30Q5VWJ9 AC015813.6-201ENST00000624409 5808 ntBASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 AL031119.1-201ENST00000404707 1879 ntBASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 RNU1-94P-201ENST00000362627 173 ntBASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 RNU1-82P-201ENST00000390851 165 ntBASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 RPL7P27-201ENST00000403775 720 ntBASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 ARL4AP5-201ENST00000404372 599 ntBASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 EIF4A1P3-201ENST00000411521 244 ntBASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 AC096533.1-201ENST00000411645 353 ntBASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 LIPT1P1-201ENST00000415870 1186 ntBASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 RPS27AP7-201ENST00000422792 455 ntBASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 AL929288.2-201ENST00000446368 407 ntBASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 AC073587.1-201ENST00000447093 876 ntBASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 TPT1P13-201ENST00000449760 499 ntBASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 NDUFA12P1-201ENST00000455914 406 ntBASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 CDC42P1-201ENST00000456658 548 ntBASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 APOOP2-201ENST00000461561 539 ntBASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 AC006463.2-201ENST00000473326 348 ntBASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SNX30Q5VWJ9 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms