Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC068620.3-201ENST00000602749 560 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 AC095055.1-201ENST00000603472 1113 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 AL390816.3-201ENST00000604527 1066 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 AL512329.2-201ENST00000607350 548 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 AC126915.2-201ENST00000610957 190 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 VN1R74P-201ENST00000613259 503 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.24□□□□□ -1.73
SCN1BQ07699 AC099494.2-201ENST00000623371 978 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN1BQ07699 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN1BQ07699 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN1BQ07699 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCN1BQ07699 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.24□□□□□ -1.73
SCN1BQ07699 AC011978.2-201ENST00000569835 2054 ntBASIC4.24□□□□□ -1.73
SCN1BQ07699 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SCN1BQ07699 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCN1BQ07699 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN1BQ07699 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCN1BQ07699 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.24□□□□□ -1.73
SCN1BQ07699 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCN1BQ07699 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
SCN1BQ07699 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SCN1BQ07699 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SCN1BQ07699 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCN1BQ07699 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.23□□□□□ -1.73
SCN1BQ07699 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.23□□□□□ -1.73
SCN1BQ07699 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCN1BQ07699 RNU6-356P-201ENST00000384140 107 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 RNU6-549P-201ENST00000384433 107 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 NUDT19P3-201ENST00000404698 555 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 ZNF603P-201ENST00000405613 487 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 UBE2V1P9-201ENST00000414760 368 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 GJA6P-201ENST00000415117 1042 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 RPS26P56-201ENST00000444468 240 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 RPL29P29-201ENST00000448725 423 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 AURKAPS1-201ENST00000451805 1212 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.23□□□□□ -1.73
SCN1BQ07699 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.23□□□□□ -1.73
SCN1BQ07699 UBA52P7-201ENST00000486088 380 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.23□□□□□ -1.73
SCN1BQ07699 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCN1BQ07699 AC018797.3-201ENST00000513388 1241 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 IGKV3D-34-201ENST00000522638 302 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.23□□□□□ -1.73
SCN1BQ07699 AC012339.2-201ENST00000523996 453 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.23□□□□□ -1.73
SCN1BQ07699 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.23□□□□□ -1.73
SCN1BQ07699 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.23□□□□□ -1.73
SCN1BQ07699 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.23□□□□□ -1.73
SCN1BQ07699 CENPUP2-201ENST00000555897 1186 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.23□□□□□ -1.73
SCN1BQ07699 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCN1BQ07699 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.23□□□□□ -1.73
SCN1BQ07699 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.23□□□□□ -1.73
SCN1BQ07699 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.23□□□□□ -1.73
SCN1BQ07699 AC022069.1-201ENST00000582910 658 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 OR1AB1P-201ENST00000585564 761 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.23□□□□□ -1.73
SCN1BQ07699 AC008759.1-201ENST00000589783 983 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.23□□□□□ -1.73
SCN1BQ07699 AC005377.1-201ENST00000605126 456 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 AC019206.1-201ENST00000621938 425 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 AC106858.1-201ENST00000637497 429 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.23□□□□□ -1.73
SCN1BQ07699 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
SCN1BQ07699 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCN1BQ07699 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCN1BQ07699 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCN1BQ07699 ELL2P4-201ENST00000446870 1376 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.23□□□□□ -1.73
SCN1BQ07699 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCN1BQ07699 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCN1BQ07699 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCN1BQ07699 AC007390.2-201ENST00000606229 3803 ntBASIC4.23□□□□□ -1.73
SCN1BQ07699 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SCN1BQ07699 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCN1BQ07699 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCN1BQ07699 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCN1BQ07699 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.22□□□□□ -1.73
SCN1BQ07699 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.22□□□□□ -1.73
SCN1BQ07699 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCN1BQ07699 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SCN1BQ07699 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.22□□□□□ -1.73
SCN1BQ07699 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SCN1BQ07699 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SCN1BQ07699 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCN1BQ07699 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCN1BQ07699 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCN1BQ07699 RNA5SP435-201ENST00000364044 108 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.22□□□□□ -1.73
SCN1BQ07699 MIR93-201ENST00000385024 80 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 AC136624.1-201ENST00000400791 413 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 MTCO2P31-201ENST00000402702 684 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.22□□□□□ -1.73
SCN1BQ07699 AC073264.1-201ENST00000411508 416 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 AC069218.2-201ENST00000411665 344 ntBASIC4.22□□□□□ -1.73
SCN1BQ07699 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.22□□□□□ -1.73
SCN1BQ07699 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.22□□□□□ -1.73
SCN1BQ07699 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms