Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC107982.3-201ENST00000584957 985 ntBASIC4.78□□□□□ -1.64
CCNA1P78396 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.78□□□□□ -1.64
CCNA1P78396 AC112230.1-201ENST00000604342 547 ntBASIC4.78□□□□□ -1.64
CCNA1P78396 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.78□□□□□ -1.64
CCNA1P78396 AC009318.3-201ENST00000616916 503 ntBASIC4.78□□□□□ -1.64
CCNA1P78396 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.78□□□□□ -1.64
CCNA1P78396 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.78□□□□□ -1.64
CCNA1P78396 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCNA1P78396 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCNA1P78396 NEAT1-202ENST00000501122 22743 ntBASIC4.78□□□□□ -1.64
CCNA1P78396 AC016588.2-201ENST00000632484 3021 ntBASIC4.78□□□□□ -1.64
CCNA1P78396 AC116667.1-201ENST00000604855 2072 ntBASIC4.77□□□□□ -1.65
CCNA1P78396 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CCNA1P78396 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CCNA1P78396 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCNA1P78396 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CCNA1P78396 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.77□□□□□ -1.65
CCNA1P78396 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCNA1P78396 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCNA1P78396 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCNA1P78396 SNORA60-201ENST00000362396 134 ntBASIC4.77□□□□□ -1.65
CCNA1P78396 RNA5SP372-201ENST00000390836 115 ntBASIC4.77□□□□□ -1.65
CCNA1P78396 RNU4-6P-201ENST00000410804 122 ntBASIC4.77□□□□□ -1.65
CCNA1P78396 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.77□□□□□ -1.65
CCNA1P78396 AC073464.3-201ENST00000422564 712 ntBASIC4.77□□□□□ -1.65
CCNA1P78396 SEC63P1-201ENST00000425785 1258 ntBASIC4.77□□□□□ -1.65
CCNA1P78396 AL691449.1-201ENST00000426570 421 ntBASIC4.77□□□□□ -1.65
CCNA1P78396 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.77□□□□□ -1.65
CCNA1P78396 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.77□□□□□ -1.65
CCNA1P78396 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.77□□□□□ -1.65
CCNA1P78396 RPL7P15-201ENST00000461190 712 ntBASIC4.77□□□□□ -1.65
CCNA1P78396 RPL7P1-201ENST00000468161 747 ntBASIC4.77□□□□□ -1.65
CCNA1P78396 RPL7P9-201ENST00000468715 747 ntBASIC4.77□□□□□ -1.65
CCNA1P78396 RPL7L1P8-201ENST00000469911 741 ntBASIC4.77□□□□□ -1.65
CCNA1P78396 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.77□□□□□ -1.65
CCNA1P78396 RPS4XP18-201ENST00000495480 763 ntBASIC4.77□□□□□ -1.65
CCNA1P78396 AC104164.2-201ENST00000496953 495 ntBASIC4.77□□□□□ -1.65
CCNA1P78396 SNORD116-26-201ENST00000516006 96 ntBASIC4.77□□□□□ -1.65
CCNA1P78396 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.77□□□□□ -1.65
CCNA1P78396 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.77□□□□□ -1.65
CCNA1P78396 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.77□□□□□ -1.65
CCNA1P78396 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.77□□□□□ -1.65
CCNA1P78396 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.77□□□□□ -1.65
CCNA1P78396 AC005034.4-201ENST00000603612 899 ntBASIC4.77□□□□□ -1.65
CCNA1P78396 IMMP1LP1-201ENST00000605170 488 ntBASIC4.77□□□□□ -1.65
CCNA1P78396 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.77□□□□□ -1.65
CCNA1P78396 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.77□□□□□ -1.65
CCNA1P78396 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.77□□□□□ -1.65
CCNA1P78396 NF1P10-201ENST00000613227 742 ntBASIC4.77□□□□□ -1.65
CCNA1P78396 CR392039.5-201ENST00000623201 510 ntBASIC4.77□□□□□ -1.65
CCNA1P78396 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.77□□□□□ -1.65
CCNA1P78396 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.77□□□□□ -1.65
CCNA1P78396 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
CCNA1P78396 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.77□□□□□ -1.65
CCNA1P78396 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCNA1P78396 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCNA1P78396 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.77□□□□□ -1.65
CCNA1P78396 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCNA1P78396 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCNA1P78396 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.77□□□□□ -1.65
CCNA1P78396 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCNA1P78396 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCNA1P78396 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.76□□□□□ -1.65
CCNA1P78396 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
CCNA1P78396 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCNA1P78396 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.76□□□□□ -1.65
CCNA1P78396 AL590704.1-201ENST00000402856 794 ntBASIC4.76□□□□□ -1.65
CCNA1P78396 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CCNA1P78396 HSPE1P12-201ENST00000412576 301 ntBASIC4.76□□□□□ -1.65
CCNA1P78396 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.76□□□□□ -1.65
CCNA1P78396 AL161631.1-201ENST00000417933 486 ntBASIC4.76□□□□□ -1.65
CCNA1P78396 AL035246.1-201ENST00000433554 1255 ntBASIC4.76□□□□□ -1.65
CCNA1P78396 PPIAP13-201ENST00000434706 478 ntBASIC4.76□□□□□ -1.65
CCNA1P78396 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.76□□□□□ -1.65
CCNA1P78396 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.76□□□□□ -1.65
CCNA1P78396 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.76□□□□□ -1.65
CCNA1P78396 GAPDHP36-201ENST00000480688 918 ntBASIC4.76□□□□□ -1.65
CCNA1P78396 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCNA1P78396 AC113430.1-201ENST00000506872 718 ntBASIC4.76□□□□□ -1.65
CCNA1P78396 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.76□□□□□ -1.65
CCNA1P78396 AC117525.1-201ENST00000515228 503 ntBASIC4.76□□□□□ -1.65
CCNA1P78396 OR7E10P-201ENST00000526420 991 ntBASIC4.76□□□□□ -1.65
CCNA1P78396 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.76□□□□□ -1.65
CCNA1P78396 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.76□□□□□ -1.65
CCNA1P78396 AL049874.4-201ENST00000557593 255 ntBASIC4.76□□□□□ -1.65
CCNA1P78396 MIR3944-201ENST00000581277 108 ntBASIC4.76□□□□□ -1.65
CCNA1P78396 AC024220.1-201ENST00000603675 484 ntBASIC4.76□□□□□ -1.65
CCNA1P78396 MIR7151-201ENST00000617477 60 ntBASIC4.76□□□□□ -1.65
CCNA1P78396 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.76□□□□□ -1.65
CCNA1P78396 AC039056.2-201ENST00000622261 511 ntBASIC4.76□□□□□ -1.65
CCNA1P78396 AP006248.2-201ENST00000623309 592 ntBASIC4.76□□□□□ -1.65
CCNA1P78396 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.76□□□□□ -1.65
CCNA1P78396 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCNA1P78396 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCNA1P78396 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCNA1P78396 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCNA1P78396 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CCNA1P78396 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCNA1P78396 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
CCNA1P78396 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms