Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 HDGFP1-201ENST00000405943 252 ntBASIC4.46□□□□□ -1.7
CDH13P55290 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.46□□□□□ -1.7
CDH13P55290 RN7SKP267-201ENST00000410381 285 ntBASIC4.46□□□□□ -1.7
CDH13P55290 RNA5SP113-201ENST00000410486 84 ntBASIC4.46□□□□□ -1.7
CDH13P55290 AC092638.1-201ENST00000411966 1275 ntBASIC4.46□□□□□ -1.7
CDH13P55290 GAPDHP49-201ENST00000421421 961 ntBASIC4.46□□□□□ -1.7
CDH13P55290 EIF4EP1-201ENST00000422311 642 ntBASIC4.46□□□□□ -1.7
CDH13P55290 AL031736.2-201ENST00000426573 787 ntBASIC4.46□□□□□ -1.7
CDH13P55290 RPL21P110-201ENST00000433345 446 ntBASIC4.46□□□□□ -1.7
CDH13P55290 UBE2V1P5-201ENST00000440070 405 ntBASIC4.46□□□□□ -1.7
CDH13P55290 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.46□□□□□ -1.7
CDH13P55290 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.46□□□□□ -1.7
CDH13P55290 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH13P55290 AC005002.1-201ENST00000447458 540 ntBASIC4.46□□□□□ -1.7
CDH13P55290 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.46□□□□□ -1.7
CDH13P55290 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.46□□□□□ -1.7
CDH13P55290 RNU7-140P-201ENST00000459546 60 ntBASIC4.46□□□□□ -1.7
CDH13P55290 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.46□□□□□ -1.7
CDH13P55290 AC104763.1-201ENST00000475274 360 ntBASIC4.46□□□□□ -1.7
CDH13P55290 AC104982.1-201ENST00000478775 574 ntBASIC4.46□□□□□ -1.7
CDH13P55290 AC073522.1-201ENST00000483312 377 ntBASIC4.46□□□□□ -1.7
CDH13P55290 AC108022.1-201ENST00000493466 478 ntBASIC4.46□□□□□ -1.7
CDH13P55290 CAB39P1-201ENST00000502277 460 ntBASIC4.46□□□□□ -1.7
CDH13P55290 AF186190.1-201ENST00000517470 480 ntBASIC4.46□□□□□ -1.7
CDH13P55290 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.46□□□□□ -1.7
CDH13P55290 OR4A2P-201ENST00000527276 913 ntBASIC4.46□□□□□ -1.7
CDH13P55290 AC139103.1-201ENST00000534696 1030 ntBASIC4.46□□□□□ -1.7
CDH13P55290 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.46□□□□□ -1.7
CDH13P55290 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.46□□□□□ -1.7
CDH13P55290 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.46□□□□□ -1.7
CDH13P55290 BGLT3-201ENST00000564523 994 ntBASIC4.46□□□□□ -1.7
CDH13P55290 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.46□□□□□ -1.7
CDH13P55290 AL606834.3-201ENST00000602615 496 ntBASIC4.46□□□□□ -1.7
CDH13P55290 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.46□□□□□ -1.7
CDH13P55290 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.46□□□□□ -1.7
CDH13P55290 RPL26P30-202ENST00000602923 645 ntBASIC4.46□□□□□ -1.7
CDH13P55290 AC023762.1-201ENST00000603280 584 ntBASIC4.46□□□□□ -1.7
CDH13P55290 AL031320.1-201ENST00000604177 357 ntBASIC4.46□□□□□ -1.7
CDH13P55290 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.46□□□□□ -1.7
CDH13P55290 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH13P55290 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.46□□□□□ -1.7
CDH13P55290 AC099654.8-201ENST00000637757 681 ntBASIC4.46□□□□□ -1.7
CDH13P55290 OR14L1P-202ENST00000641545 3009 ntBASIC4.46□□□□□ -1.7
CDH13P55290 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDH13P55290 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH13P55290 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH13P55290 DDX18P3-201ENST00000404856 2007 ntBASIC4.46□□□□□ -1.7
CDH13P55290 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH13P55290 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CDH13P55290 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.46□□□□□ -1.7
CDH13P55290 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CDH13P55290 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDH13P55290 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CDH13P55290 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
CDH13P55290 AC091046.3-201ENST00000631455 1574 ntBASIC4.45□□□□□ -1.7
CDH13P55290 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH13P55290 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH13P55290 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.45□□□□□ -1.7
CDH13P55290 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CDH13P55290 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH13P55290 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CDH13P55290 AC011155.1-201ENST00000316512 456 ntBASIC4.45□□□□□ -1.7
CDH13P55290 RNA5SP28-201ENST00000363841 119 ntBASIC4.45□□□□□ -1.7
CDH13P55290 RNU6-353P-201ENST00000364266 108 ntBASIC4.45□□□□□ -1.7
CDH13P55290 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDH13P55290 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH13P55290 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH13P55290 MTND2P15-201ENST00000418575 892 ntBASIC4.45□□□□□ -1.7
CDH13P55290 USP9YP21-201ENST00000420603 432 ntBASIC4.45□□□□□ -1.7
CDH13P55290 PDSS1P1-201ENST00000422953 1114 ntBASIC4.45□□□□□ -1.7
CDH13P55290 AC005154.2-201ENST00000438110 379 ntBASIC4.45□□□□□ -1.7
CDH13P55290 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH13P55290 RPS26P30-201ENST00000443431 335 ntBASIC4.45□□□□□ -1.7
CDH13P55290 MTND1P33-201ENST00000446251 917 ntBASIC4.45□□□□□ -1.7
CDH13P55290 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH13P55290 SCARNA10-201ENST00000459255 330 ntBASIC4.45□□□□□ -1.7
CDH13P55290 RPL23AP65-201ENST00000475608 468 ntBASIC4.45□□□□□ -1.7
CDH13P55290 RN7SL41P-201ENST00000476144 297 ntBASIC4.45□□□□□ -1.7
CDH13P55290 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH13P55290 AC004453.1-201ENST00000487895 408 ntBASIC4.45□□□□□ -1.7
CDH13P55290 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDH13P55290 AC023050.1-201ENST00000498198 304 ntBASIC4.45□□□□□ -1.7
CDH13P55290 SNORD116-26-201ENST00000516006 96 ntBASIC4.45□□□□□ -1.7
CDH13P55290 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDH13P55290 IGJP1-201ENST00000522682 475 ntBASIC4.45□□□□□ -1.7
CDH13P55290 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.45□□□□□ -1.7
CDH13P55290 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH13P55290 AL110118.1-201ENST00000553543 400 ntBASIC4.45□□□□□ -1.7
CDH13P55290 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.45□□□□□ -1.7
CDH13P55290 AC084757.1-201ENST00000559987 490 ntBASIC4.45□□□□□ -1.7
CDH13P55290 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH13P55290 CYP2C60P-201ENST00000566088 139 ntBASIC4.45□□□□□ -1.7
CDH13P55290 HMGB2P1-201ENST00000591146 634 ntBASIC4.45□□□□□ -1.7
CDH13P55290 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH13P55290 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH13P55290 RPL7P50-201ENST00000600588 727 ntBASIC4.45□□□□□ -1.7
CDH13P55290 AC073091.2-201ENST00000603205 907 ntBASIC4.45□□□□□ -1.7
CDH13P55290 AC103792.1-201ENST00000603591 919 ntBASIC4.45□□□□□ -1.7
CDH13P55290 AC093765.1-201ENST00000603758 881 ntBASIC4.45□□□□□ -1.7
CDH13P55290 AC133552.5-201ENST00000604266 540 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms