Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 OR4R2P-201ENST00000530815 597 ntBASIC4.39□□□□□ -1.71
LIMK2P53671 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
LIMK2P53671 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LIMK2P53671 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.39□□□□□ -1.71
LIMK2P53671 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.39□□□□□ -1.71
LIMK2P53671 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.39□□□□□ -1.71
LIMK2P53671 AC069240.1-201ENST00000548774 375 ntBASIC4.39□□□□□ -1.71
LIMK2P53671 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.39□□□□□ -1.71
LIMK2P53671 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LIMK2P53671 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.39□□□□□ -1.71
LIMK2P53671 AL671309.1-201ENST00000603750 544 ntBASIC4.39□□□□□ -1.71
LIMK2P53671 AC133552.5-201ENST00000604266 540 ntBASIC4.39□□□□□ -1.71
LIMK2P53671 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.39□□□□□ -1.71
LIMK2P53671 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.39□□□□□ -1.71
LIMK2P53671 AC068831.8-201ENST00000620171 435 ntBASIC4.39□□□□□ -1.71
LIMK2P53671 AC015908.5-201ENST00000623289 343 ntBASIC4.39□□□□□ -1.71
LIMK2P53671 AC019278.1-201ENST00000623516 479 ntBASIC4.39□□□□□ -1.71
LIMK2P53671 AP003497.2-201ENST00000624220 967 ntBASIC4.39□□□□□ -1.71
LIMK2P53671 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LIMK2P53671 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.39□□□□□ -1.71
LIMK2P53671 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.39□□□□□ -1.71
LIMK2P53671 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
LIMK2P53671 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.39□□□□□ -1.71
LIMK2P53671 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LIMK2P53671 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
LIMK2P53671 MFSD8-242ENST00000641690 4199 ntBASIC4.39□□□□□ -1.71
LIMK2P53671 AP000756.2-201ENST00000624168 2567 ntBASIC4.39□□□□□ -1.71
LIMK2P53671 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.39□□□□□ -1.71
LIMK2P53671 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.38□□□□□ -1.71
LIMK2P53671 AL592182.3-201ENST00000642132 3304 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LIMK2P53671 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LIMK2P53671 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.38□□□□□ -1.71
LIMK2P53671 AC009951.1-201ENST00000623674 2614 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.38□□□□□ -1.71
LIMK2P53671 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.38□□□□□ -1.71
LIMK2P53671 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LIMK2P53671 RNA5SP52-201ENST00000362448 134 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LIMK2P53671 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LIMK2P53671 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
LIMK2P53671 RNU6-185P-201ENST00000384421 107 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 OR6C69P-201ENST00000394268 893 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 NCSTNP1-201ENST00000406229 144 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.38□□□□□ -1.71
LIMK2P53671 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.38□□□□□ -1.71
LIMK2P53671 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.38□□□□□ -1.71
LIMK2P53671 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.38□□□□□ -1.71
LIMK2P53671 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.38□□□□□ -1.71
LIMK2P53671 AC004975.1-201ENST00000428733 208 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 AC073508.1-201ENST00000428866 656 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.38□□□□□ -1.71
LIMK2P53671 RPS29P17-201ENST00000430795 166 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 AC011998.1-201ENST00000433403 117 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 MTCO1P52-201ENST00000433928 531 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LIMK2P53671 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.38□□□□□ -1.71
LIMK2P53671 RN7SL303P-201ENST00000469773 251 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.38□□□□□ -1.71
LIMK2P53671 RN7SL810P-201ENST00000493031 276 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 AC008628.1-201ENST00000508663 265 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.38□□□□□ -1.71
LIMK2P53671 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.38□□□□□ -1.71
LIMK2P53671 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.38□□□□□ -1.71
LIMK2P53671 AC093014.1-201ENST00000548926 724 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 CR383656.14-201ENST00000551951 406 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 AC022884.3-201ENST00000579571 248 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 MIR3939-201ENST00000582614 106 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 AC123786.2-201ENST00000603459 275 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 AL512506.1-201ENST00000613918 449 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 MIR1264-201ENST00000616374 69 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 LINC00901.1-201ENST00000617252 152 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 AP004607.9-201ENST00000618202 316 ntBASIC4.38□□□□□ -1.71
LIMK2P53671 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LIMK2P53671 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.38□□□□□ -1.71
LIMK2P53671 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.38□□□□□ -1.71
LIMK2P53671 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
LIMK2P53671 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LIMK2P53671 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LIMK2P53671 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
LIMK2P53671 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.37□□□□□ -1.71
LIMK2P53671 LINC01109-201ENST00000603837 3081 ntBASIC4.37□□□□□ -1.71
LIMK2P53671 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LIMK2P53671 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LIMK2P53671 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LIMK2P53671 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.37□□□□□ -1.71
LIMK2P53671 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
LIMK2P53671 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LIMK2P53671 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LIMK2P53671 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LIMK2P53671 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LIMK2P53671 AL512430.2-201ENST00000406786 339 ntBASIC4.37□□□□□ -1.71
LIMK2P53671 RPS26P47-201ENST00000427219 348 ntBASIC4.37□□□□□ -1.71
LIMK2P53671 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.37□□□□□ -1.71
LIMK2P53671 RPL34P26-201ENST00000445636 354 ntBASIC4.37□□□□□ -1.71
LIMK2P53671 GXYLT1P1-201ENST00000446657 490 ntBASIC4.37□□□□□ -1.71
LIMK2P53671 RPL23AP23-201ENST00000452590 471 ntBASIC4.37□□□□□ -1.71
LIMK2P53671 NUTF2P7-201ENST00000453086 375 ntBASIC4.37□□□□□ -1.71
LIMK2P53671 AC009963.2-201ENST00000453431 138 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms