Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.49□□□□□ -1.53
MSH6P52701 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
MSH6P52701 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
MSH6P52701 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MSH6P52701 AP002001.2-201ENST00000529025 1469 ntBASIC5.49□□□□□ -1.53
MSH6P52701 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MSH6P52701 SNORD35B-201ENST00000363660 87 ntBASIC5.49□□□□□ -1.53
MSH6P52701 RNU6-1279P-201ENST00000383917 103 ntBASIC5.49□□□□□ -1.53
MSH6P52701 MIR128-1-201ENST00000384921 82 ntBASIC5.49□□□□□ -1.53
MSH6P52701 SEPT7P8-201ENST00000413308 775 ntBASIC5.49□□□□□ -1.53
MSH6P52701 TCEA1P2-201ENST00000420496 906 ntBASIC5.49□□□□□ -1.53
MSH6P52701 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.49□□□□□ -1.53
MSH6P52701 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.49□□□□□ -1.53
MSH6P52701 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.49□□□□□ -1.53
MSH6P52701 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
MSH6P52701 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.49□□□□□ -1.53
MSH6P52701 AC063950.1-201ENST00000552036 308 ntBASIC5.49□□□□□ -1.53
MSH6P52701 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.49□□□□□ -1.53
MSH6P52701 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC5.49□□□□□ -1.53
MSH6P52701 AC079880.2-201ENST00000603790 1213 ntBASIC5.49□□□□□ -1.53
MSH6P52701 AC026979.4-201ENST00000606555 645 ntBASIC5.49□□□□□ -1.53
MSH6P52701 AC243312.2-201ENST00000623340 601 ntBASIC5.49□□□□□ -1.53
MSH6P52701 CR392039.4-201ENST00000624968 501 ntBASIC5.49□□□□□ -1.53
MSH6P52701 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.49□□□□□ -1.53
MSH6P52701 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
MSH6P52701 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MSH6P52701 AL132656.3-201ENST00000606384 1595 ntBASIC5.49□□□□□ -1.53
MSH6P52701 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
MSH6P52701 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
MSH6P52701 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
MSH6P52701 MAPK10-303ENST00000641324 3959 ntBASIC5.48□□□□□ -1.53
MSH6P52701 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.48□□□□□ -1.53
MSH6P52701 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
MSH6P52701 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.48□□□□□ -1.53
MSH6P52701 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.48□□□□□ -1.53
MSH6P52701 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
MSH6P52701 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MSH6P52701 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
MSH6P52701 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MSH6P52701 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MSH6P52701 ARL4AP3-201ENST00000441452 574 ntBASIC5.48□□□□□ -1.53
MSH6P52701 RPL21P23-201ENST00000446654 460 ntBASIC5.48□□□□□ -1.53
MSH6P52701 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MSH6P52701 MTND6P6-201ENST00000478031 263 ntBASIC5.48□□□□□ -1.53
MSH6P52701 RNU7-143P-201ENST00000516781 65 ntBASIC5.48□□□□□ -1.53
MSH6P52701 SLC25A36P1-201ENST00000590111 465 ntBASIC5.48□□□□□ -1.53
MSH6P52701 AC006272.2-201ENST00000594725 163 ntBASIC5.48□□□□□ -1.53
MSH6P52701 QTRT1P1-201ENST00000604344 1078 ntBASIC5.48□□□□□ -1.53
MSH6P52701 AC023509.5-201ENST00000617434 807 ntBASIC5.48□□□□□ -1.53
MSH6P52701 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
MSH6P52701 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.48□□□□□ -1.53
MSH6P52701 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC5.48□□□□□ -1.53
MSH6P52701 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
MSH6P52701 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
MSH6P52701 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.48□□□□□ -1.53
MSH6P52701 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MSH6P52701 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
MSH6P52701 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MSH6P52701 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MSH6P52701 AC120036.2-201ENST00000509729 1474 ntBASIC5.47□□□□□ -1.53
MSH6P52701 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.47□□□□□ -1.53
MSH6P52701 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.47□□□□□ -1.53
MSH6P52701 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MSH6P52701 RNA5SP51-201ENST00000364750 119 ntBASIC5.47□□□□□ -1.53
MSH6P52701 Y_RNA.500-201ENST00000384466 111 ntBASIC5.47□□□□□ -1.53
MSH6P52701 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MSH6P52701 RNU6ATAC10P-201ENST00000408635 111 ntBASIC5.47□□□□□ -1.53
MSH6P52701 DPY19L1P2-201ENST00000426647 915 ntBASIC5.47□□□□□ -1.53
MSH6P52701 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.47□□□□□ -1.53
MSH6P52701 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.47□□□□□ -1.53
MSH6P52701 AC006960.3-201ENST00000561845 705 ntBASIC5.47□□□□□ -1.53
MSH6P52701 RPL23AP87-202ENST00000573039 466 ntBASIC5.47□□□□□ -1.53
MSH6P52701 DPRXP4-201ENST00000578053 568 ntBASIC5.47□□□□□ -1.53
MSH6P52701 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.47□□□□□ -1.53
MSH6P52701 SNX6P1-201ENST00000601728 1224 ntBASIC5.47□□□□□ -1.53
MSH6P52701 AC015722.2-201ENST00000622210 551 ntBASIC5.47□□□□□ -1.53
MSH6P52701 AL353684.1-201ENST00000622677 1120 ntBASIC5.47□□□□□ -1.53
MSH6P52701 AL392088.2-201ENST00000637607 285 ntBASIC5.47□□□□□ -1.53
MSH6P52701 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.47□□□□□ -1.53
MSH6P52701 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
MSH6P52701 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.47□□□□□ -1.53
MSH6P52701 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
MSH6P52701 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
MSH6P52701 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
MSH6P52701 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MSH6P52701 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
MSH6P52701 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.46□□□□□ -1.53
MSH6P52701 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
MSH6P52701 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.54
MSH6P52701 AC026523.2-201ENST00000625039 7739 ntBASIC5.46□□□□□ -1.54
MSH6P52701 ATP5A1P2-201ENST00000412323 255 ntBASIC5.46□□□□□ -1.54
MSH6P52701 AC097713.2-201ENST00000430199 356 ntBASIC5.46□□□□□ -1.54
MSH6P52701 AP001486.1-201ENST00000463339 476 ntBASIC5.46□□□□□ -1.54
MSH6P52701 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.46□□□□□ -1.54
MSH6P52701 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.46□□□□□ -1.54
MSH6P52701 AC087369.1-201ENST00000520775 996 ntBASIC5.46□□□□□ -1.54
MSH6P52701 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
MSH6P52701 AC100770.1-201ENST00000532310 322 ntBASIC5.46□□□□□ -1.54
MSH6P52701 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.46□□□□□ -1.54
MSH6P52701 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms