Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PPIAP20-201ENST00000449839 135 ntBASIC6.46□□□□□ -1.38
USP11P51784 RPL7P51-201ENST00000490532 749 ntBASIC6.46□□□□□ -1.38
USP11P51784 AC108078.1-201ENST00000508073 725 ntBASIC6.46□□□□□ -1.38
USP11P51784 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.46□□□□□ -1.38
USP11P51784 CDC42P3-201ENST00000518493 633 ntBASIC6.46□□□□□ -1.38
USP11P51784 IGKV3D-34-201ENST00000522638 302 ntBASIC6.46□□□□□ -1.38
USP11P51784 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC6.46□□□□□ -1.38
USP11P51784 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.46□□□□□ -1.38
USP11P51784 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.46□□□□□ -1.38
USP11P51784 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.46□□□□□ -1.38
USP11P51784 AC137768.1-201ENST00000549998 553 ntBASIC6.46□□□□□ -1.38
USP11P51784 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.46□□□□□ -1.38
USP11P51784 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.46□□□□□ -1.38
USP11P51784 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.46□□□□□ -1.38
USP11P51784 HSPE1P2-201ENST00000554777 306 ntBASIC6.46□□□□□ -1.38
USP11P51784 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.46□□□□□ -1.38
USP11P51784 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.46□□□□□ -1.38
USP11P51784 AL592295.2-201ENST00000612578 206 ntBASIC6.46□□□□□ -1.38
USP11P51784 AC093838.1-201ENST00000613014 469 ntBASIC6.46□□□□□ -1.38
USP11P51784 AL445264.1-201ENST00000621719 171 ntBASIC6.46□□□□□ -1.38
USP11P51784 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.46□□□□□ -1.38
USP11P51784 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.46□□□□□ -1.38
USP11P51784 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.46□□□□□ -1.38
USP11P51784 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.46□□□□□ -1.38
USP11P51784 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
USP11P51784 AC012078.1-201ENST00000405035 1646 ntBASIC6.46□□□□□ -1.38
USP11P51784 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
USP11P51784 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.46□□□□□ -1.38
USP11P51784 AC232271.1-201ENST00000602455 2715 ntBASIC6.46□□□□□ -1.38
USP11P51784 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
USP11P51784 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.46□□□□□ -1.38
USP11P51784 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USP11P51784 AL137141.1-201ENST00000624622 4836 ntBASIC6.46□□□□□ -1.38
USP11P51784 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USP11P51784 NSRP1P1-201ENST00000444067 1693 ntBASIC6.45□□□□□ -1.38
USP11P51784 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
USP11P51784 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
USP11P51784 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.45□□□□□ -1.38
USP11P51784 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.45□□□□□ -1.38
USP11P51784 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USP11P51784 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.45□□□□□ -1.38
USP11P51784 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
USP11P51784 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.45□□□□□ -1.38
USP11P51784 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USP11P51784 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USP11P51784 AL359955.1-201ENST00000455242 3275 ntBASIC6.45□□□□□ -1.38
USP11P51784 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
USP11P51784 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USP11P51784 AL672167.2-201ENST00000377164 879 ntBASIC6.45□□□□□ -1.38
USP11P51784 SNORA17A-201ENST00000391185 133 ntBASIC6.45□□□□□ -1.38
USP11P51784 AC005522.1-201ENST00000395416 346 ntBASIC6.45□□□□□ -1.38
USP11P51784 OR2AT2P-201ENST00000413438 905 ntBASIC6.45□□□□□ -1.38
USP11P51784 CLUHP1-201ENST00000435012 1190 ntBASIC6.45□□□□□ -1.38
USP11P51784 AL450996.1-201ENST00000445574 1202 ntBASIC6.45□□□□□ -1.38
USP11P51784 RPL39P6-201ENST00000448289 150 ntBASIC6.45□□□□□ -1.38
USP11P51784 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
USP11P51784 RPS29P25-201ENST00000481709 171 ntBASIC6.45□□□□□ -1.38
USP11P51784 DUTP7-201ENST00000507982 486 ntBASIC6.45□□□□□ -1.38
USP11P51784 AC138866.2-201ENST00000508650 584 ntBASIC6.45□□□□□ -1.38
USP11P51784 RNU6-430P-201ENST00000517078 107 ntBASIC6.45□□□□□ -1.38
USP11P51784 AC125612.1-201ENST00000547580 377 ntBASIC6.45□□□□□ -1.38
USP11P51784 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.45□□□□□ -1.38
USP11P51784 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC6.45□□□□□ -1.38
USP11P51784 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.45□□□□□ -1.38
USP11P51784 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC6.45□□□□□ -1.38
USP11P51784 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.45□□□□□ -1.38
USP11P51784 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.45□□□□□ -1.38
USP11P51784 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.45□□□□□ -1.38
USP11P51784 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC6.45□□□□□ -1.38
USP11P51784 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.45□□□□□ -1.38
USP11P51784 YWHAQP7-201ENST00000603536 658 ntBASIC6.45□□□□□ -1.38
USP11P51784 AC008277.2-201ENST00000605196 797 ntBASIC6.45□□□□□ -1.38
USP11P51784 RNA5SP440-201ENST00000612665 119 ntBASIC6.45□□□□□ -1.38
USP11P51784 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC6.45□□□□□ -1.38
USP11P51784 CU639417.4-201ENST00000623928 207 ntBASIC6.45□□□□□ -1.38
USP11P51784 SNORA17.5-201ENST00000630429 132 ntBASIC6.45□□□□□ -1.38
USP11P51784 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.45□□□□□ -1.38
USP11P51784 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
USP11P51784 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USP11P51784 SRRM1P3-201ENST00000426911 2678 ntBASIC6.45□□□□□ -1.38
USP11P51784 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
USP11P51784 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USP11P51784 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.45□□□□□ -1.38
USP11P51784 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.45□□□□□ -1.38
USP11P51784 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
USP11P51784 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.45□□□□□ -1.38
USP11P51784 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.45□□□□□ -1.38
USP11P51784 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USP11P51784 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USP11P51784 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
USP11P51784 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
USP11P51784 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.45□□□□□ -1.38
USP11P51784 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USP11P51784 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USP11P51784 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.44□□□□□ -1.38
USP11P51784 AC093671.1-201ENST00000624981 2929 ntBASIC6.44□□□□□ -1.38
USP11P51784 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USP11P51784 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
USP11P51784 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
USP11P51784 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms