Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.97□□□□□ -1.45
MRE11P49959 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MRE11P49959 AC007115.1-201ENST00000546853 234 ntBASIC5.97□□□□□ -1.45
MRE11P49959 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.97□□□□□ -1.45
MRE11P49959 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.97□□□□□ -1.45
MRE11P49959 AC063949.1-201ENST00000552900 865 ntBASIC5.97□□□□□ -1.45
MRE11P49959 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.97□□□□□ -1.45
MRE11P49959 PARP1P2-201ENST00000556806 195 ntBASIC5.97□□□□□ -1.45
MRE11P49959 AC002400.1-201ENST00000569310 726 ntBASIC5.97□□□□□ -1.45
MRE11P49959 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
MRE11P49959 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.97□□□□□ -1.45
MRE11P49959 VN1R83P-201ENST00000595685 445 ntBASIC5.97□□□□□ -1.45
MRE11P49959 AP001981.2-201ENST00000603241 418 ntBASIC5.97□□□□□ -1.45
MRE11P49959 AC107304.1-201ENST00000604229 296 ntBASIC5.97□□□□□ -1.45
MRE11P49959 AC072039.2-201ENST00000608883 439 ntBASIC5.97□□□□□ -1.45
MRE11P49959 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.97□□□□□ -1.45
MRE11P49959 MIR6758-201ENST00000620653 63 ntBASIC5.97□□□□□ -1.45
MRE11P49959 AC091931.1-201ENST00000623488 728 ntBASIC5.97□□□□□ -1.45
MRE11P49959 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
MRE11P49959 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MRE11P49959 AL022322.2-201ENST00000624072 20397 ntBASIC5.97□□□□□ -1.45
MRE11P49959 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MRE11P49959 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.97□□□□□ -1.45
MRE11P49959 AL390237.1-201ENST00000404226 1415 ntBASIC5.97□□□□□ -1.45
MRE11P49959 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.97□□□□□ -1.45
MRE11P49959 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
MRE11P49959 HSPA8P18-201ENST00000439846 1928 ntBASIC5.97□□□□□ -1.45
MRE11P49959 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MRE11P49959 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
MRE11P49959 SOCS5P3-201ENST00000425115 1576 ntBASIC5.97□□□□□ -1.45
MRE11P49959 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.45
MRE11P49959 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.96□□□□□ -1.45
MRE11P49959 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
MRE11P49959 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.96□□□□□ -1.45
MRE11P49959 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
MRE11P49959 AC017007.4-201ENST00000503353 1352 ntBASIC5.96□□□□□ -1.45
MRE11P49959 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.96□□□□□ -1.46
MRE11P49959 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
MRE11P49959 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
MRE11P49959 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
MRE11P49959 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MRE11P49959 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
MRE11P49959 RNU1-87P-201ENST00000363727 170 ntBASIC5.96□□□□□ -1.46
MRE11P49959 RNU4-75P-201ENST00000364621 146 ntBASIC5.96□□□□□ -1.46
MRE11P49959 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.96□□□□□ -1.46
MRE11P49959 RAC1P8-201ENST00000427086 527 ntBASIC5.96□□□□□ -1.46
MRE11P49959 MTND1P32-201ENST00000433043 938 ntBASIC5.96□□□□□ -1.46
MRE11P49959 HMGB3P24-201ENST00000433260 622 ntBASIC5.96□□□□□ -1.46
MRE11P49959 OR52B5P-201ENST00000435337 951 ntBASIC5.96□□□□□ -1.46
MRE11P49959 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.96□□□□□ -1.46
MRE11P49959 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.96□□□□□ -1.46
MRE11P49959 CYCSP12-201ENST00000437729 300 ntBASIC5.96□□□□□ -1.46
MRE11P49959 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MRE11P49959 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.96□□□□□ -1.46
MRE11P49959 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MRE11P49959 RBMY2TP-201ENST00000451162 947 ntBASIC5.96□□□□□ -1.46
MRE11P49959 AC097262.1-201ENST00000452559 548 ntBASIC5.96□□□□□ -1.46
MRE11P49959 BZW1P2-201ENST00000473537 826 ntBASIC5.96□□□□□ -1.46
MRE11P49959 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
MRE11P49959 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.96□□□□□ -1.46
MRE11P49959 AC008565.1-201ENST00000509046 885 ntBASIC5.96□□□□□ -1.46
MRE11P49959 AC093755.1-201ENST00000512950 1023 ntBASIC5.96□□□□□ -1.46
MRE11P49959 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.96□□□□□ -1.46
MRE11P49959 SNORA31.13-201ENST00000516624 135 ntBASIC5.96□□□□□ -1.46
MRE11P49959 MTND1P5-201ENST00000517906 940 ntBASIC5.96□□□□□ -1.46
MRE11P49959 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.96□□□□□ -1.46
MRE11P49959 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.96□□□□□ -1.46
MRE11P49959 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.96□□□□□ -1.46
MRE11P49959 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.96□□□□□ -1.46
MRE11P49959 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.96□□□□□ -1.46
MRE11P49959 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.96□□□□□ -1.46
MRE11P49959 PCNPP1-201ENST00000552501 511 ntBASIC5.96□□□□□ -1.46
MRE11P49959 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.96□□□□□ -1.46
MRE11P49959 AC087465.1-201ENST00000560574 245 ntBASIC5.96□□□□□ -1.46
MRE11P49959 AC095055.1-201ENST00000603472 1113 ntBASIC5.96□□□□□ -1.46
MRE11P49959 AP000811.1-201ENST00000603803 651 ntBASIC5.96□□□□□ -1.46
MRE11P49959 AL162431.4-201ENST00000604674 411 ntBASIC5.96□□□□□ -1.46
MRE11P49959 AL163642.2-201ENST00000604722 1019 ntBASIC5.96□□□□□ -1.46
MRE11P49959 AC103591.3-201ENST00000608684 209 ntBASIC5.96□□□□□ -1.46
MRE11P49959 AL392088.2-201ENST00000637607 285 ntBASIC5.96□□□□□ -1.46
MRE11P49959 AC006927.3-201ENST00000638789 384 ntBASIC5.96□□□□□ -1.46
MRE11P49959 OR52B5P-202ENST00000641118 1110 ntBASIC5.96□□□□□ -1.46
MRE11P49959 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.96□□□□□ -1.46
MRE11P49959 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
MRE11P49959 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
MRE11P49959 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
MRE11P49959 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
MRE11P49959 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MRE11P49959 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
MRE11P49959 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.96□□□□□ -1.46
MRE11P49959 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.96□□□□□ -1.46
MRE11P49959 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.96□□□□□ -1.46
MRE11P49959 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.95□□□□□ -1.46
MRE11P49959 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
MRE11P49959 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MRE11P49959 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MRE11P49959 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
MRE11P49959 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MRE11P49959 AC126755.2-208ENST00000327792 462 ntBASIC5.95□□□□□ -1.46
MRE11P49959 AC138969.1-213ENST00000331436 462 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms