Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 MIR3191-201ENST00000636300 76 ntBASIC8.91□□□□□ -0.98
HOXD11P31277 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC8.91□□□□□ -0.98
HOXD11P31277 MAGEE1-201ENST00000361470 3630 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
HOXD11P31277 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HOXD11P31277 IST1-226ENST00000606369 3583 ntTSL 2 BASIC8.91□□□□□ -0.98
HOXD11P31277 GUCY1B2-204ENST00000531898 1979 ntBASIC8.91□□□□□ -0.98
HOXD11P31277 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
HOXD11P31277 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
HOXD11P31277 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
HOXD11P31277 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC8.91□□□□□ -0.98
HOXD11P31277 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HOXD11P31277 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC8.91□□□□□ -0.98
HOXD11P31277 AL513302.2-201ENST00000562313 1842 ntBASIC8.91□□□□□ -0.98
HOXD11P31277 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
HOXD11P31277 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HOXD11P31277 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
HOXD11P31277 IGSF1-201ENST00000361420 4378 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
HOXD11P31277 USP17L15-202ENST00000621432 1680 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
HOXD11P31277 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
HOXD11P31277 KBTBD11-OT1-204ENST00000635855 6169 ntAPPRIS P5 TSL 5 BASIC8.91□□□□□ -0.98
HOXD11P31277 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HOXD11P31277 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
HOXD11P31277 ANKRD13C-202ENST00000370944 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HOXD11P31277 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC8.9□□□□□ -0.98
HOXD11P31277 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
HOXD11P31277 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
HOXD11P31277 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
HOXD11P31277 RRP12-201ENST00000315563 4038 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
HOXD11P31277 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC8.9□□□□□ -0.98
HOXD11P31277 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC8.9□□□□□ -0.98
HOXD11P31277 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HOXD11P31277 MIR494-201ENST00000349529 81 ntBASIC8.9□□□□□ -0.98
HOXD11P31277 RNA5SP145-201ENST00000363124 125 ntBASIC8.9□□□□□ -0.98
HOXD11P31277 RNU6-137P-201ENST00000363680 108 ntBASIC8.9□□□□□ -0.98
HOXD11P31277 SNORD14B-201ENST00000364533 90 ntBASIC8.9□□□□□ -0.98
HOXD11P31277 MIR488-201ENST00000365739 83 ntBASIC8.9□□□□□ -0.98
HOXD11P31277 CST9LP1-201ENST00000376987 444 ntBASIC8.9□□□□□ -0.98
HOXD11P31277 RNU6-1074P-201ENST00000383995 104 ntBASIC8.9□□□□□ -0.98
HOXD11P31277 RNU6-1124P-201ENST00000384169 107 ntBASIC8.9□□□□□ -0.98
HOXD11P31277 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
HOXD11P31277 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
HOXD11P31277 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC8.9□□□□□ -0.98
HOXD11P31277 LINC00328-2P-201ENST00000436585 219 ntBASIC8.9□□□□□ -0.98
HOXD11P31277 SNX25P1-201ENST00000441817 834 ntBASIC8.9□□□□□ -0.98
HOXD11P31277 AL590399.6-201ENST00000446396 307 ntBASIC8.9□□□□□ -0.98
HOXD11P31277 RN7SL854P-201ENST00000459767 295 ntBASIC8.9□□□□□ -0.98
HOXD11P31277 RN7SL659P-201ENST00000483093 299 ntBASIC8.9□□□□□ -0.98
HOXD11P31277 RN7SL635P-201ENST00000492123 296 ntBASIC8.9□□□□□ -0.98
HOXD11P31277 AF186996.7-201ENST00000492781 209 ntBASIC8.9□□□□□ -0.98
HOXD11P31277 MTND6P8-201ENST00000503471 522 ntBASIC8.9□□□□□ -0.98
HOXD11P31277 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC8.9□□□□□ -0.98
HOXD11P31277 LINC02489-201ENST00000527239 354 ntTSL 3 BASIC8.9□□□□□ -0.98
HOXD11P31277 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC8.9□□□□□ -0.98
HOXD11P31277 AL138963.2-201ENST00000605137 226 ntBASIC8.9□□□□□ -0.98
HOXD11P31277 ST7-OT3_2.1-201ENST00000617884 137 ntBASIC8.9□□□□□ -0.98
HOXD11P31277 TPD52L3-202ENST00000344545 2296 ntAPPRIS P4 BASIC8.9□□□□□ -0.98
HOXD11P31277 AC006269.1-201ENST00000636752 2789 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
HOXD11P31277 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HOXD11P31277 LARS-201ENST00000274562 2213 ntTSL 2 BASIC8.9□□□□□ -0.98
HOXD11P31277 TIAM1-207ENST00000636887 4160 ntTSL 5 BASIC8.9□□□□□ -0.98
HOXD11P31277 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
HOXD11P31277 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
HOXD11P31277 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC8.9□□□□□ -0.98
HOXD11P31277 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
HOXD11P31277 AC011447.6-201ENST00000623510 2598 ntBASIC8.9□□□□□ -0.99
HOXD11P31277 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC8.9□□□□□ -0.99
HOXD11P31277 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
HOXD11P31277 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC8.9□□□□□ -0.99
HOXD11P31277 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
HOXD11P31277 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.99
HOXD11P31277 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
HOXD11P31277 FAM71F2-205ENST00000641605 5749 ntBASIC8.89□□□□□ -0.99
HOXD11P31277 DERL2-201ENST00000158771 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
HOXD11P31277 MAPK8-206ENST00000374189 5796 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
HOXD11P31277 AC018992.1-201ENST00000523778 2149 ntBASIC8.89□□□□□ -0.99
HOXD11P31277 PKD1L3-201ENST00000620267 5199 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
HOXD11P31277 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
HOXD11P31277 EDAR-202ENST00000376651 4303 ntTSL 2 BASIC8.89□□□□□ -0.99
HOXD11P31277 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
HOXD11P31277 RNA5SP52-201ENST00000362448 134 ntBASIC8.89□□□□□ -0.99
HOXD11P31277 RNU6-228P-201ENST00000362700 106 ntBASIC8.89□□□□□ -0.99
HOXD11P31277 SNORA71D-201ENST00000363484 134 ntBASIC8.89□□□□□ -0.99
HOXD11P31277 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC8.89□□□□□ -0.99
HOXD11P31277 U6atac.2-201ENST00000408644 118 ntBASIC8.89□□□□□ -0.99
HOXD11P31277 RN7SKP139-201ENST00000410411 293 ntBASIC8.89□□□□□ -0.99
HOXD11P31277 RN7SKP89-201ENST00000410774 242 ntBASIC8.89□□□□□ -0.99
HOXD11P31277 RNA5SP304-201ENST00000411199 104 ntBASIC8.89□□□□□ -0.99
HOXD11P31277 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC8.89□□□□□ -0.99
HOXD11P31277 AL138899.2-201ENST00000439139 499 ntBASIC8.89□□□□□ -0.99
HOXD11P31277 RPL12P11-201ENST00000439970 501 ntBASIC8.89□□□□□ -0.99
HOXD11P31277 AC022730.1-201ENST00000473114 568 ntBASIC8.89□□□□□ -0.99
HOXD11P31277 RN7SL836P-201ENST00000476140 296 ntBASIC8.89□□□□□ -0.99
HOXD11P31277 AC018695.1-201ENST00000484096 664 ntBASIC8.89□□□□□ -0.99
HOXD11P31277 IGHVII-49-1-201ENST00000521760 224 ntBASIC8.89□□□□□ -0.99
HOXD11P31277 AC022034.4-201ENST00000521930 469 ntTSL 3 BASIC8.89□□□□□ -0.99
HOXD11P31277 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC8.89□□□□□ -0.99
HOXD11P31277 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC8.89□□□□□ -0.99
HOXD11P31277 AC091932.3-201ENST00000624223 323 ntBASIC8.89□□□□□ -0.99
HOXD11P31277 PSMD5-AS1-215ENST00000640622 205 ntBASIC8.89□□□□□ -0.99
HOXD11P31277 LRRC49-203ENST00000443425 3085 ntTSL 2 BASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms