Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 HMGB1P1-201ENST00000522557 636 ntBASIC5.3□□□□□ -1.56
CTGFP29279 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.3□□□□□ -1.56
CTGFP29279 OR4R3P-201ENST00000525084 838 ntBASIC5.3□□□□□ -1.56
CTGFP29279 OR4A2P-201ENST00000527276 913 ntBASIC5.3□□□□□ -1.56
CTGFP29279 AP000827.1-201ENST00000527814 258 ntBASIC5.3□□□□□ -1.56
CTGFP29279 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTGFP29279 DEFB130C-202ENST00000530001 230 ntBASIC5.3□□□□□ -1.56
CTGFP29279 OR8R1P-201ENST00000543943 764 ntBASIC5.3□□□□□ -1.56
CTGFP29279 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.3□□□□□ -1.56
CTGFP29279 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.3□□□□□ -1.56
CTGFP29279 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.3□□□□□ -1.56
CTGFP29279 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.3□□□□□ -1.56
CTGFP29279 AC091135.1-201ENST00000585943 307 ntBASIC5.3□□□□□ -1.56
CTGFP29279 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.3□□□□□ -1.56
CTGFP29279 IPO5P1-202ENST00000600039 287 ntBASIC5.3□□□□□ -1.56
CTGFP29279 AC004987.4-201ENST00000603383 338 ntBASIC5.3□□□□□ -1.56
CTGFP29279 MTND3P19-201ENST00000603825 345 ntBASIC5.3□□□□□ -1.56
CTGFP29279 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.3□□□□□ -1.56
CTGFP29279 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.3□□□□□ -1.56
CTGFP29279 AC105227.2-201ENST00000615075 605 ntBASIC5.3□□□□□ -1.56
CTGFP29279 AC009318.3-201ENST00000616916 503 ntBASIC5.3□□□□□ -1.56
CTGFP29279 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.3□□□□□ -1.56
CTGFP29279 MIR3653-201ENST00000625572 110 ntBASIC5.3□□□□□ -1.56
CTGFP29279 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.3□□□□□ -1.56
CTGFP29279 MIR492-201ENST00000638676 116 ntBASIC5.3□□□□□ -1.56
CTGFP29279 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.3□□□□□ -1.56
CTGFP29279 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTGFP29279 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTGFP29279 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTGFP29279 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CTGFP29279 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTGFP29279 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTGFP29279 AC104454.1-201ENST00000421341 1401 ntBASIC5.3□□□□□ -1.56
CTGFP29279 VN2R3P-201ENST00000422626 1412 ntBASIC5.3□□□□□ -1.56
CTGFP29279 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTGFP29279 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTGFP29279 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTGFP29279 AC004817.4-201ENST00000602396 3625 ntBASIC5.29□□□□□ -1.56
CTGFP29279 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTGFP29279 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CTGFP29279 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CTGFP29279 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CTGFP29279 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CTGFP29279 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CTGFP29279 RNA5SP27-201ENST00000363839 119 ntBASIC5.29□□□□□ -1.56
CTGFP29279 RNU1-130P-201ENST00000363930 160 ntBASIC5.29□□□□□ -1.56
CTGFP29279 RNA5SP366-201ENST00000365454 123 ntBASIC5.29□□□□□ -1.56
CTGFP29279 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CTGFP29279 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.29□□□□□ -1.56
CTGFP29279 RNU4-31P-201ENST00000384211 141 ntBASIC5.29□□□□□ -1.56
CTGFP29279 MIR142-201ENST00000384835 87 ntBASIC5.29□□□□□ -1.56
CTGFP29279 MIR670-201ENST00000390142 98 ntBASIC5.29□□□□□ -1.56
CTGFP29279 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CTGFP29279 RNU4-64P-201ENST00000410795 131 ntBASIC5.29□□□□□ -1.56
CTGFP29279 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CTGFP29279 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.29□□□□□ -1.56
CTGFP29279 AL590806.1-201ENST00000415818 853 ntBASIC5.29□□□□□ -1.56
CTGFP29279 AC017078.1-201ENST00000416146 368 ntBASIC5.29□□□□□ -1.56
CTGFP29279 AC016831.2-201ENST00000417179 352 ntBASIC5.29□□□□□ -1.56
CTGFP29279 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.29□□□□□ -1.56
CTGFP29279 AC090960.1-201ENST00000421072 306 ntBASIC5.29□□□□□ -1.56
CTGFP29279 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.29□□□□□ -1.56
CTGFP29279 NMNAT1P2-201ENST00000435192 860 ntBASIC5.29□□□□□ -1.56
CTGFP29279 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.29□□□□□ -1.56
CTGFP29279 ACTR3P2-201ENST00000439585 1257 ntBASIC5.29□□□□□ -1.56
CTGFP29279 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.29□□□□□ -1.56
CTGFP29279 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.29□□□□□ -1.56
CTGFP29279 AC068135.1-201ENST00000446164 246 ntBASIC5.29□□□□□ -1.56
CTGFP29279 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.29□□□□□ -1.56
CTGFP29279 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.29□□□□□ -1.56
CTGFP29279 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CTGFP29279 CALM1P2-201ENST00000452941 448 ntBASIC5.29□□□□□ -1.56
CTGFP29279 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.29□□□□□ -1.56
CTGFP29279 HSPE1P22-201ENST00000456856 327 ntBASIC5.29□□□□□ -1.56
CTGFP29279 RN7SL517P-201ENST00000462240 305 ntBASIC5.29□□□□□ -1.56
CTGFP29279 RN7SL98P-201ENST00000462271 300 ntBASIC5.29□□□□□ -1.56
CTGFP29279 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.29□□□□□ -1.56
CTGFP29279 UQCRHP4-201ENST00000471686 272 ntBASIC5.29□□□□□ -1.56
CTGFP29279 AC104763.1-201ENST00000475274 360 ntBASIC5.29□□□□□ -1.56
CTGFP29279 BET1P1-201ENST00000482276 359 ntBASIC5.29□□□□□ -1.56
CTGFP29279 RPS3AP22-201ENST00000488297 769 ntBASIC5.29□□□□□ -1.56
CTGFP29279 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.29□□□□□ -1.56
CTGFP29279 CDH12P2-201ENST00000504393 298 ntBASIC5.29□□□□□ -1.56
CTGFP29279 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.29□□□□□ -1.56
CTGFP29279 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.29□□□□□ -1.56
CTGFP29279 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.29□□□□□ -1.56
CTGFP29279 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CTGFP29279 RNA5SP143-201ENST00000516936 115 ntBASIC5.29□□□□□ -1.56
CTGFP29279 AC023632.4-201ENST00000517783 191 ntBASIC5.29□□□□□ -1.56
CTGFP29279 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.29□□□□□ -1.56
CTGFP29279 OR8A2P-201ENST00000528631 952 ntBASIC5.29□□□□□ -1.56
CTGFP29279 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.29□□□□□ -1.56
CTGFP29279 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
CTGFP29279 AC090695.1-201ENST00000561269 1222 ntBASIC5.29□□□□□ -1.56
CTGFP29279 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.29□□□□□ -1.56
CTGFP29279 AC025857.2-201ENST00000602711 238 ntBASIC5.29□□□□□ -1.56
CTGFP29279 AL109653.1-201ENST00000603091 248 ntBASIC5.29□□□□□ -1.56
CTGFP29279 Z99497.2-201ENST00000603634 310 ntBASIC5.29□□□□□ -1.56
CTGFP29279 AC018695.5-201ENST00000605872 315 ntBASIC5.29□□□□□ -1.56
CTGFP29279 AC016877.3-201ENST00000606778 504 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms