Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 MRPL48P1-201ENST00000445390 636 ntBASIC4.98□□□□□ -1.61
MMP3P08254 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.98□□□□□ -1.61
MMP3P08254 AC114755.5-201ENST00000447760 831 ntBASIC4.98□□□□□ -1.61
MMP3P08254 AC012671.1-201ENST00000451912 203 ntBASIC4.98□□□□□ -1.61
MMP3P08254 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.98□□□□□ -1.61
MMP3P08254 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.98□□□□□ -1.61
MMP3P08254 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.98□□□□□ -1.61
MMP3P08254 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.98□□□□□ -1.61
MMP3P08254 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.98□□□□□ -1.61
MMP3P08254 AC023424.1-201ENST00000496058 459 ntBASIC4.98□□□□□ -1.61
MMP3P08254 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.98□□□□□ -1.61
MMP3P08254 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.98□□□□□ -1.61
MMP3P08254 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.98□□□□□ -1.61
MMP3P08254 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.98□□□□□ -1.61
MMP3P08254 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.98□□□□□ -1.61
MMP3P08254 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.98□□□□□ -1.61
MMP3P08254 HMGB1P23-201ENST00000518743 568 ntBASIC4.98□□□□□ -1.61
MMP3P08254 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.98□□□□□ -1.61
MMP3P08254 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.98□□□□□ -1.61
MMP3P08254 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.98□□□□□ -1.61
MMP3P08254 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.98□□□□□ -1.61
MMP3P08254 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.98□□□□□ -1.61
MMP3P08254 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.98□□□□□ -1.61
MMP3P08254 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.98□□□□□ -1.61
MMP3P08254 AC090515.3-201ENST00000560431 315 ntBASIC4.98□□□□□ -1.61
MMP3P08254 RN7SL176P-201ENST00000580352 264 ntBASIC4.98□□□□□ -1.61
MMP3P08254 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.98□□□□□ -1.61
MMP3P08254 VN1R85P-201ENST00000601587 426 ntBASIC4.98□□□□□ -1.61
MMP3P08254 AC234772.3-201ENST00000602277 528 ntBASIC4.98□□□□□ -1.61
MMP3P08254 BPIFA4P-203ENST00000603168 689 ntBASIC4.98□□□□□ -1.61
MMP3P08254 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.98□□□□□ -1.61
MMP3P08254 AC024941.1-201ENST00000612250 334 ntBASIC4.98□□□□□ -1.61
MMP3P08254 uc_338.13-201ENST00000618243 179 ntBASIC4.98□□□□□ -1.61
MMP3P08254 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.98□□□□□ -1.61
MMP3P08254 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
MMP3P08254 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MMP3P08254 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MMP3P08254 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MMP3P08254 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MMP3P08254 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MMP3P08254 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.98□□□□□ -1.61
MMP3P08254 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.98□□□□□ -1.61
MMP3P08254 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
MMP3P08254 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
MMP3P08254 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
MMP3P08254 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
MMP3P08254 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
MMP3P08254 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
MMP3P08254 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.97□□□□□ -1.61
MMP3P08254 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
MMP3P08254 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.97□□□□□ -1.61
MMP3P08254 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.97□□□□□ -1.61
MMP3P08254 AC005261.4-201ENST00000600047 1385 ntBASIC4.97□□□□□ -1.61
MMP3P08254 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
MMP3P08254 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
MMP3P08254 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.97□□□□□ -1.61
MMP3P08254 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
MMP3P08254 RNA5SP187-201ENST00000384400 119 ntBASIC4.97□□□□□ -1.61
MMP3P08254 SNORA48.7-201ENST00000391302 135 ntBASIC4.97□□□□□ -1.61
MMP3P08254 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
MMP3P08254 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.97□□□□□ -1.61
MMP3P08254 AC092648.1-201ENST00000425870 423 ntBASIC4.97□□□□□ -1.61
MMP3P08254 AC092447.3-201ENST00000426027 686 ntBASIC4.97□□□□□ -1.61
MMP3P08254 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.97□□□□□ -1.61
MMP3P08254 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.97□□□□□ -1.61
MMP3P08254 AC097499.1-201ENST00000444277 208 ntBASIC4.97□□□□□ -1.61
MMP3P08254 AL591719.1-201ENST00000444669 744 ntBASIC4.97□□□□□ -1.61
MMP3P08254 MTND1P31-201ENST00000449206 961 ntBASIC4.97□□□□□ -1.61
MMP3P08254 RPS27AP17-201ENST00000463344 455 ntBASIC4.97□□□□□ -1.61
MMP3P08254 AC108475.1-201ENST00000507880 950 ntBASIC4.97□□□□□ -1.61
MMP3P08254 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.97□□□□□ -1.61
MMP3P08254 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.97□□□□□ -1.61
MMP3P08254 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.97□□□□□ -1.61
MMP3P08254 AC139103.1-201ENST00000534696 1030 ntBASIC4.97□□□□□ -1.61
MMP3P08254 AC011611.5-201ENST00000552477 578 ntBASIC4.97□□□□□ -1.61
MMP3P08254 AL049870.4-201ENST00000555741 486 ntBASIC4.97□□□□□ -1.61
MMP3P08254 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.97□□□□□ -1.61
MMP3P08254 MIR4660-201ENST00000583549 74 ntBASIC4.97□□□□□ -1.61
MMP3P08254 OR51H2P-202ENST00000641424 3046 ntBASIC4.97□□□□□ -1.61
MMP3P08254 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
MMP3P08254 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.97□□□□□ -1.61
MMP3P08254 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
MMP3P08254 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MMP3P08254 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MMP3P08254 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
MMP3P08254 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
MMP3P08254 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.96□□□□□ -1.61
MMP3P08254 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
MMP3P08254 AC107068.1-201ENST00000563286 4218 ntBASIC4.96□□□□□ -1.62
MMP3P08254 MIR383-201ENST00000362257 73 ntBASIC4.96□□□□□ -1.62
MMP3P08254 RNU4-7P-201ENST00000364758 141 ntBASIC4.96□□□□□ -1.62
MMP3P08254 RNU6-906P-201ENST00000384700 70 ntBASIC4.96□□□□□ -1.62
MMP3P08254 HMGB1P13-201ENST00000406019 642 ntBASIC4.96□□□□□ -1.62
MMP3P08254 HMGB3P18-201ENST00000406327 590 ntBASIC4.96□□□□□ -1.62
MMP3P08254 MTATP6P20-201ENST00000414147 562 ntBASIC4.96□□□□□ -1.62
MMP3P08254 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.96□□□□□ -1.62
MMP3P08254 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
MMP3P08254 RPL23AP4-201ENST00000427757 463 ntBASIC4.96□□□□□ -1.62
MMP3P08254 AC092634.2-201ENST00000428146 1010 ntBASIC4.96□□□□□ -1.62
MMP3P08254 NMNAT1P2-201ENST00000435192 860 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms