Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 EIF4A1P11-201ENST00000451239 222 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 CYCSP35-201ENST00000451978 304 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.07□□□□□ -1.6
COL5A2P05997 AC104849.1-201ENST00000462623 405 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 AC006517.1-201ENST00000480485 328 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 RN7SL271P-201ENST00000487601 295 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 AC111000.5-201ENST00000506559 1178 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 MTND2P31-201ENST00000512602 616 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 RN7SKP46-201ENST00000515942 234 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 RNU6-551P-201ENST00000516661 103 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.07□□□□□ -1.6
COL5A2P05997 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.07□□□□□ -1.6
COL5A2P05997 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.07□□□□□ -1.6
COL5A2P05997 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.07□□□□□ -1.6
COL5A2P05997 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
COL5A2P05997 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
COL5A2P05997 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
COL5A2P05997 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
COL5A2P05997 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL5A2P05997 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL5A2P05997 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL5A2P05997 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
COL5A2P05997 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.06□□□□□ -1.6
COL5A2P05997 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL5A2P05997 MAPK10-303ENST00000641324 3959 ntBASIC5.06□□□□□ -1.6
COL5A2P05997 OR6K3-202ENST00000368146 996 ntBASIC5.06□□□□□ -1.6
COL5A2P05997 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.06□□□□□ -1.6
COL5A2P05997 MIR1271-201ENST00000408537 86 ntBASIC5.06□□□□□ -1.6
COL5A2P05997 MTND2P11-201ENST00000423638 648 ntBASIC5.06□□□□□ -1.6
COL5A2P05997 AC097713.2-201ENST00000430199 356 ntBASIC5.06□□□□□ -1.6
COL5A2P05997 DEFB109F-201ENST00000491870 277 ntBASIC5.06□□□□□ -1.6
COL5A2P05997 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
COL5A2P05997 RNA5SP164-201ENST00000516533 110 ntBASIC5.06□□□□□ -1.6
COL5A2P05997 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC5.06□□□□□ -1.6
COL5A2P05997 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.06□□□□□ -1.6
COL5A2P05997 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.06□□□□□ -1.6
COL5A2P05997 RPL21P7-201ENST00000557463 483 ntBASIC5.06□□□□□ -1.6
COL5A2P05997 AL137849.1-201ENST00000604767 169 ntBASIC5.06□□□□□ -1.6
COL5A2P05997 AC022106.2-201ENST00000620114 757 ntBASIC5.06□□□□□ -1.6
COL5A2P05997 AC079684.1-201ENST00000621405 437 ntBASIC5.06□□□□□ -1.6
COL5A2P05997 AC005858.4-201ENST00000623191 700 ntBASIC5.06□□□□□ -1.6
COL5A2P05997 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.06□□□□□ -1.6
COL5A2P05997 AC244258.1-201ENST00000637553 1071 ntBASIC5.06□□□□□ -1.6
COL5A2P05997 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
COL5A2P05997 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL5A2P05997 AC093591.2-201ENST00000565254 3843 ntBASIC5.05□□□□□ -1.6
COL5A2P05997 HSPD1P11-201ENST00000508643 1702 ntBASIC5.05□□□□□ -1.6
COL5A2P05997 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.05□□□□□ -1.6
COL5A2P05997 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.05□□□□□ -1.6
COL5A2P05997 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
COL5A2P05997 AP001273.1-201ENST00000624493 3152 ntBASIC5.05□□□□□ -1.6
COL5A2P05997 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL5A2P05997 AC083843.2-201ENST00000568248 6253 ntBASIC5.05□□□□□ -1.6
COL5A2P05997 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL5A2P05997 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL5A2P05997 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL5A2P05997 MTND3P20-201ENST00000407663 186 ntBASIC5.05□□□□□ -1.6
COL5A2P05997 AL121878.1-201ENST00000418638 859 ntBASIC5.05□□□□□ -1.6
COL5A2P05997 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.05□□□□□ -1.6
COL5A2P05997 RSL24D1P2-201ENST00000445584 366 ntBASIC5.05□□□□□ -1.6
COL5A2P05997 NPM1P28-201ENST00000492269 840 ntBASIC5.05□□□□□ -1.6
COL5A2P05997 RPL7P24-201ENST00000493052 752 ntBASIC5.05□□□□□ -1.6
COL5A2P05997 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.05□□□□□ -1.6
COL5A2P05997 RN7SKP57-201ENST00000517248 293 ntBASIC5.05□□□□□ -1.6
COL5A2P05997 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL5A2P05997 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.05□□□□□ -1.6
COL5A2P05997 GTF2IP8-201ENST00000560687 584 ntBASIC5.05□□□□□ -1.6
COL5A2P05997 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL5A2P05997 AC023509.5-201ENST00000617434 807 ntBASIC5.05□□□□□ -1.6
COL5A2P05997 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL5A2P05997 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.05□□□□□ -1.6
COL5A2P05997 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
COL5A2P05997 MTCO1P8-201ENST00000416914 1523 ntBASIC5.04□□□□□ -1.6
COL5A2P05997 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL5A2P05997 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL5A2P05997 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL5A2P05997 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL5A2P05997 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL5A2P05997 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.04□□□□□ -1.6
COL5A2P05997 AL391219.1-201ENST00000422570 483 ntBASIC5.04□□□□□ -1.6
COL5A2P05997 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.04□□□□□ -1.6
COL5A2P05997 HMGB1P37-201ENST00000439613 609 ntBASIC5.04□□□□□ -1.6
COL5A2P05997 RPS29P2-201ENST00000479278 136 ntBASIC5.04□□□□□ -1.6
COL5A2P05997 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.04□□□□□ -1.6
COL5A2P05997 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.04□□□□□ -1.6
COL5A2P05997 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.04□□□□□ -1.6
COL5A2P05997 AC005014.3-201ENST00000605985 190 ntBASIC5.04□□□□□ -1.6
COL5A2P05997 AC016590.3-201ENST00000611171 753 ntBASIC5.04□□□□□ -1.6
COL5A2P05997 AL139089.1-201ENST00000620372 975 ntBASIC5.04□□□□□ -1.6
COL5A2P05997 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.04□□□□□ -1.6
COL5A2P05997 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.04□□□□□ -1.6
COL5A2P05997 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
COL5A2P05997 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
COL5A2P05997 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC5.04□□□□□ -1.6
COL5A2P05997 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COL5A2P05997 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
COL5A2P05997 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
COL5A2P05997 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
COL5A2P05997 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL5A2P05997 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms