Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.11□□□□□ -1.75
MT-ND1P03886 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.11□□□□□ -1.75
MT-ND1P03886 UBE2FP2-201ENST00000566646 462 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 MIR4458-201ENST00000578872 75 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.11□□□□□ -1.75
MT-ND1P03886 OR1AB1P-201ENST00000585564 761 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 AL133338.2-201ENST00000604292 736 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 AP000894.4-201ENST00000610185 483 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.11□□□□□ -1.75
MT-ND1P03886 AL023881.1-201ENST00000621088 301 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.11□□□□□ -1.75
MT-ND1P03886 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.11□□□□□ -1.75
MT-ND1P03886 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MT-ND1P03886 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
MT-ND1P03886 AL592182.3-201ENST00000642132 3304 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MT-ND1P03886 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
MT-ND1P03886 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
MT-ND1P03886 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.1□□□□□ -1.75
MT-ND1P03886 AC134882.1-201ENST00000603738 1676 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
MT-ND1P03886 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.1□□□□□ -1.75
MT-ND1P03886 RNU1-87P-201ENST00000363727 170 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
MT-ND1P03886 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
MT-ND1P03886 RNU6-1279P-201ENST00000383917 103 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 MIR142-201ENST00000384835 87 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 MIR105-2-201ENST00000385083 81 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 HMGB1P10-201ENST00000395823 563 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 TAF9BP2-201ENST00000400856 499 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MT-ND1P03886 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.1□□□□□ -1.75
MT-ND1P03886 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.1□□□□□ -1.75
MT-ND1P03886 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.1□□□□□ -1.75
MT-ND1P03886 PTP4A1P3-201ENST00000433661 420 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.1□□□□□ -1.75
MT-ND1P03886 VN1R54P-201ENST00000435210 1049 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 ELOCP11-201ENST00000436690 332 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 AC073648.4-201ENST00000442655 781 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 ELOCP16-201ENST00000444494 332 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 TPTE2P6-202ENST00000445572 1007 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 AC092685.1-201ENST00000447960 1243 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 VN1R32P-201ENST00000452234 905 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.1□□□□□ -1.75
MT-ND1P03886 RPS20P4-201ENST00000461659 355 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 AC110749.1-201ENST00000462007 357 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 RPS3AP41-201ENST00000462701 778 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 RN7SL329P-201ENST00000467740 299 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 AL161747.1-201ENST00000480068 358 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 AC011005.3-201ENST00000491624 395 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 RPL30P11-201ENST00000495304 339 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.1□□□□□ -1.75
MT-ND1P03886 AC016550.1-201ENST00000505348 785 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 NDUFB5P1-201ENST00000508134 564 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
MT-ND1P03886 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.1□□□□□ -1.75
MT-ND1P03886 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.1□□□□□ -1.75
MT-ND1P03886 AP001922.4-201ENST00000526967 290 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 PHBP17-201ENST00000528576 541 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 DEFB109D-201ENST00000529497 240 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
MT-ND1P03886 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.1□□□□□ -1.75
MT-ND1P03886 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.1□□□□□ -1.75
MT-ND1P03886 DYNLL1P4-201ENST00000549314 266 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 AL161713.1-201ENST00000555538 145 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.1□□□□□ -1.75
MT-ND1P03886 MIR3934-201ENST00000579806 107 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.1□□□□□ -1.75
MT-ND1P03886 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
MT-ND1P03886 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.1□□□□□ -1.75
MT-ND1P03886 PCNAP1-202ENST00000595299 752 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MT-ND1P03886 AP000240.1-201ENST00000609910 452 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.1□□□□□ -1.75
MT-ND1P03886 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
MT-ND1P03886 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.1□□□□□ -1.75
MT-ND1P03886 AL590396.2-201ENST00000636511 1041 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
MT-ND1P03886 AC131971.1-201ENST00000332881 1482 ntBASIC4.1□□□□□ -1.75
MT-ND1P03886 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
MT-ND1P03886 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
MT-ND1P03886 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
MT-ND1P03886 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.09□□□□□ -1.75
MT-ND1P03886 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
MT-ND1P03886 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.09□□□□□ -1.75
MT-ND1P03886 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
MT-ND1P03886 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
MT-ND1P03886 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.09□□□□□ -1.75
MT-ND1P03886 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
MT-ND1P03886 METTL21EP-201ENST00000298105 713 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
MT-ND1P03886 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
MT-ND1P03886 RNA5SP388-201ENST00000362584 119 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 RNU6-252P-201ENST00000363232 107 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 SNORD66.1-201ENST00000391230 76 ntBASIC4.09□□□□□ -1.75
MT-ND1P03886 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.09□□□□□ -1.75
MT-ND1P03886 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.09□□□□□ -1.75
MT-ND1P03886 RNA5SP306-201ENST00000411087 107 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms