Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
COL4A1P02462 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
COL4A1P02462 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.52□□□□□ -1.69
COL4A1P02462 NDUFB1P1-201ENST00000435191 180 ntBASIC4.52□□□□□ -1.69
COL4A1P02462 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.52□□□□□ -1.69
COL4A1P02462 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A1P02462 TPTE2P3-201ENST00000441562 1189 ntBASIC4.52□□□□□ -1.69
COL4A1P02462 AL591503.2-201ENST00000442314 1005 ntBASIC4.52□□□□□ -1.69
COL4A1P02462 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A1P02462 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A1P02462 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A1P02462 AL133244.1-201ENST00000456007 258 ntBASIC4.52□□□□□ -1.69
COL4A1P02462 AC025518.1-201ENST00000479856 347 ntBASIC4.52□□□□□ -1.69
COL4A1P02462 RN7SL271P-201ENST00000487601 295 ntBASIC4.52□□□□□ -1.69
COL4A1P02462 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A1P02462 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A1P02462 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A1P02462 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.52□□□□□ -1.69
COL4A1P02462 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.52□□□□□ -1.69
COL4A1P02462 AC133552.5-201ENST00000604266 540 ntBASIC4.52□□□□□ -1.69
COL4A1P02462 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.52□□□□□ -1.69
COL4A1P02462 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.52□□□□□ -1.69
COL4A1P02462 AC244258.1-201ENST00000637553 1071 ntBASIC4.52□□□□□ -1.69
COL4A1P02462 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.52□□□□□ -1.69
COL4A1P02462 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A1P02462 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A1P02462 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A1P02462 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.52□□□□□ -1.69
COL4A1P02462 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A1P02462 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A1P02462 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
COL4A1P02462 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A1P02462 RPS7P15-201ENST00000415804 584 ntBASIC4.51□□□□□ -1.69
COL4A1P02462 DPY19L1P2-201ENST00000426647 915 ntBASIC4.51□□□□□ -1.69
COL4A1P02462 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.51□□□□□ -1.69
COL4A1P02462 ARL4AP1-201ENST00000503220 705 ntBASIC4.51□□□□□ -1.69
COL4A1P02462 AC026427.2-201ENST00000506228 536 ntBASIC4.51□□□□□ -1.69
COL4A1P02462 DEFB109D-201ENST00000529497 240 ntBASIC4.51□□□□□ -1.69
COL4A1P02462 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.51□□□□□ -1.69
COL4A1P02462 AC069240.1-201ENST00000548774 375 ntBASIC4.51□□□□□ -1.69
COL4A1P02462 AC093014.1-201ENST00000548926 724 ntBASIC4.51□□□□□ -1.69
COL4A1P02462 AC079880.2-201ENST00000603790 1213 ntBASIC4.51□□□□□ -1.69
COL4A1P02462 AC018816.2-201ENST00000621460 353 ntBASIC4.51□□□□□ -1.69
COL4A1P02462 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.51□□□□□ -1.69
COL4A1P02462 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
COL4A1P02462 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A1P02462 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A1P02462 MTND5P1-201ENST00000445440 1375 ntBASIC4.51□□□□□ -1.69
COL4A1P02462 LINC01109-201ENST00000603837 3081 ntBASIC4.51□□□□□ -1.69
COL4A1P02462 AL121839.2-201ENST00000565058 6943 ntBASIC4.51□□□□□ -1.69
COL4A1P02462 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.51□□□□□ -1.69
COL4A1P02462 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A1P02462 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.51□□□□□ -1.69
COL4A1P02462 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
COL4A1P02462 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A1P02462 AC073063.1-201ENST00000434352 607 ntBASIC4.51□□□□□ -1.69
COL4A1P02462 SETD6P1-201ENST00000444575 317 ntBASIC4.51□□□□□ -1.69
COL4A1P02462 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.51□□□□□ -1.69
COL4A1P02462 AC119751.5-201ENST00000514077 770 ntBASIC4.51□□□□□ -1.69
COL4A1P02462 AL355365.1-201ENST00000616480 294 ntBASIC4.51□□□□□ -1.69
COL4A1P02462 BNIP3P41-202ENST00000616656 861 ntBASIC4.51□□□□□ -1.69
COL4A1P02462 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.51□□□□□ -1.69
COL4A1P02462 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
COL4A1P02462 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A1P02462 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL4A1P02462 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC4.5□□□□□ -1.69
COL4A1P02462 RPS4XP12-201ENST00000461747 709 ntBASIC4.5□□□□□ -1.69
COL4A1P02462 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.5□□□□□ -1.69
COL4A1P02462 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.5□□□□□ -1.69
COL4A1P02462 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.5□□□□□ -1.69
COL4A1P02462 RNA5SP164-201ENST00000516533 110 ntBASIC4.5□□□□□ -1.69
COL4A1P02462 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.5□□□□□ -1.69
COL4A1P02462 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.5□□□□□ -1.69
COL4A1P02462 AL121834.1-201ENST00000572284 509 ntBASIC4.5□□□□□ -1.69
COL4A1P02462 MIR5195-201ENST00000583555 115 ntBASIC4.5□□□□□ -1.69
COL4A1P02462 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.5□□□□□ -1.69
COL4A1P02462 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.5□□□□□ -1.69
COL4A1P02462 AL049840.6-202ENST00000603373 279 ntBASIC4.5□□□□□ -1.69
COL4A1P02462 AC006077.1-201ENST00000604746 343 ntBASIC4.5□□□□□ -1.69
COL4A1P02462 AL669942.2-201ENST00000620352 697 ntBASIC4.5□□□□□ -1.69
COL4A1P02462 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
COL4A1P02462 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.5□□□□□ -1.69
COL4A1P02462 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL4A1P02462 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL4A1P02462 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL4A1P02462 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL4A1P02462 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL4A1P02462 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL4A1P02462 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL4A1P02462 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
COL4A1P02462 CDY3P-201ENST00000454543 1618 ntBASIC4.49□□□□□ -1.69
COL4A1P02462 SNORD17-201ENST00000390930 237 ntBASIC4.49□□□□□ -1.69
COL4A1P02462 AC010740.1-201ENST00000417035 684 ntBASIC4.49□□□□□ -1.69
COL4A1P02462 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.49□□□□□ -1.69
COL4A1P02462 SDCBPP2-201ENST00000424643 885 ntBASIC4.49□□□□□ -1.69
COL4A1P02462 AC005326.1-201ENST00000429197 123 ntBASIC4.49□□□□□ -1.69
COL4A1P02462 AC097713.2-201ENST00000430199 356 ntBASIC4.49□□□□□ -1.69
COL4A1P02462 AC069285.2-201ENST00000440210 275 ntBASIC4.49□□□□□ -1.69
COL4A1P02462 AC092641.1-201ENST00000440229 772 ntBASIC4.49□□□□□ -1.69
COL4A1P02462 RBMY2UP-201ENST00000453474 324 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms