Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.34□□□□□ -1.71
CLPTM1O96005 OR7E128P-201ENST00000532736 1024 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 NPM1P35-201ENST00000533043 868 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 CYB5AP5-201ENST00000549779 389 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.34□□□□□ -1.71
CLPTM1O96005 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CLPTM1O96005 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.34□□□□□ -1.71
CLPTM1O96005 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.34□□□□□ -1.71
CLPTM1O96005 AP001160.4-201ENST00000596971 382 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 CLIC4P2-201ENST00000601934 717 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 AL445435.1-201ENST00000604232 665 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 AL139286.1-201ENST00000604465 483 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 AC133644.2-201ENST00000608142 540 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 AL031666.3-201ENST00000609320 1006 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 AP004607.9-201ENST00000618202 316 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CLPTM1O96005 AC000123.2-201ENST00000623124 461 ntBASIC4.34□□□□□ -1.71
CLPTM1O96005 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.34□□□□□ -1.71
CLPTM1O96005 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.34□□□□□ -1.71
CLPTM1O96005 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLPTM1O96005 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
CLPTM1O96005 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLPTM1O96005 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLPTM1O96005 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLPTM1O96005 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLPTM1O96005 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLPTM1O96005 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CLPTM1O96005 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CLPTM1O96005 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLPTM1O96005 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLPTM1O96005 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLPTM1O96005 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLPTM1O96005 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.33□□□□□ -1.72
CLPTM1O96005 AC093311.1-201ENST00000506586 2021 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLPTM1O96005 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLPTM1O96005 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLPTM1O96005 AL136164.3-201ENST00000624429 3978 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 RNU1-15P-201ENST00000353977 144 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLPTM1O96005 RNA5SP123-201ENST00000363244 119 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.33□□□□□ -1.72
CLPTM1O96005 UBE2V1P9-201ENST00000414760 368 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 UBTFL3-201ENST00000418934 1024 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 AC023128.2-201ENST00000420880 1223 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.33□□□□□ -1.72
CLPTM1O96005 AC115285.1-201ENST00000424879 736 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 RPL21P43-201ENST00000425440 472 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.33□□□□□ -1.72
CLPTM1O96005 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.33□□□□□ -1.72
CLPTM1O96005 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.33□□□□□ -1.72
CLPTM1O96005 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.33□□□□□ -1.72
CLPTM1O96005 AL354714.3-201ENST00000447284 493 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 TCEA1P1-201ENST00000449716 880 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 AL096803.2-201ENST00000450032 677 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 IGHV5-78-201ENST00000450948 295 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 RPL7P61-201ENST00000451721 751 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 AL645939.1-201ENST00000453429 797 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 AC008280.2-201ENST00000455473 307 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 RN7SL329P-201ENST00000467740 299 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 UBTFL6-201ENST00000477929 1024 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 RN7SL826P-201ENST00000479724 288 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 RPS3AP6-201ENST00000484430 795 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 RPS26P15-201ENST00000488067 348 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.33□□□□□ -1.72
CLPTM1O96005 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.33□□□□□ -1.72
CLPTM1O96005 COX6B1P5-201ENST00000509843 249 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 PARP4P3-201ENST00000510265 317 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.33□□□□□ -1.72
CLPTM1O96005 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 RNU2-30P-201ENST00000516209 141 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 AC091163.3-201ENST00000518269 1144 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLPTM1O96005 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.33□□□□□ -1.72
CLPTM1O96005 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.33□□□□□ -1.72
CLPTM1O96005 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.33□□□□□ -1.72
CLPTM1O96005 NMNAT1P1-201ENST00000554095 876 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 AC068714.1-201ENST00000559623 800 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.33□□□□□ -1.72
CLPTM1O96005 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.33□□□□□ -1.72
CLPTM1O96005 AC091178.1-203ENST00000584586 279 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 BNIP3P32-201ENST00000600015 554 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 AC008536.1-201ENST00000602872 669 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 AP002802.2-201ENST00000605877 235 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 AL157392.4-201ENST00000609756 345 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.33□□□□□ -1.72
CLPTM1O96005 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.33□□□□□ -1.72
CLPTM1O96005 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.33□□□□□ -1.72
CLPTM1O96005 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLPTM1O96005 MAPK10-253ENST00000641010 4072 ntBASIC4.33□□□□□ -1.72
CLPTM1O96005 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLPTM1O96005 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLPTM1O96005 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLPTM1O96005 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLPTM1O96005 AC097504.1-201ENST00000515103 2415 ntBASIC4.32□□□□□ -1.72
CLPTM1O96005 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLPTM1O96005 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.32□□□□□ -1.72
CLPTM1O96005 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CLPTM1O96005 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms