Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
GRIN3BO60391 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC6.56□□□□□ -1.36
GRIN3BO60391 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.56□□□□□ -1.36
GRIN3BO60391 AL592447.1-201ENST00000447592 540 ntBASIC6.56□□□□□ -1.36
GRIN3BO60391 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.56□□□□□ -1.36
GRIN3BO60391 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.56□□□□□ -1.36
GRIN3BO60391 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
GRIN3BO60391 AC126182.1-201ENST00000478134 357 ntBASIC6.56□□□□□ -1.36
GRIN3BO60391 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC6.56□□□□□ -1.36
GRIN3BO60391 MTAPP1-201ENST00000489154 819 ntBASIC6.56□□□□□ -1.36
GRIN3BO60391 AC016957.1-201ENST00000534895 309 ntBASIC6.56□□□□□ -1.36
GRIN3BO60391 AC090424.1-201ENST00000535243 736 ntBASIC6.56□□□□□ -1.36
GRIN3BO60391 OR7K1P-201ENST00000546439 926 ntBASIC6.56□□□□□ -1.36
GRIN3BO60391 AC008083.2-201ENST00000546707 476 ntBASIC6.56□□□□□ -1.36
GRIN3BO60391 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
GRIN3BO60391 MIR132-201ENST00000591554 101 ntBASIC6.56□□□□□ -1.36
GRIN3BO60391 NANOGP3-201ENST00000605855 286 ntBASIC6.56□□□□□ -1.36
GRIN3BO60391 AC008498.1-201ENST00000613012 531 ntBASIC6.56□□□□□ -1.36
GRIN3BO60391 AL353726.1-201ENST00000614041 1000 ntBASIC6.56□□□□□ -1.36
GRIN3BO60391 MLECP1-201ENST00000615893 709 ntBASIC6.56□□□□□ -1.36
GRIN3BO60391 AL008636.1-201ENST00000625038 1018 ntBASIC6.56□□□□□ -1.36
GRIN3BO60391 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.56□□□□□ -1.36
GRIN3BO60391 OR52H1-202ENST00000641796 1061 ntBASIC6.56□□□□□ -1.36
GRIN3BO60391 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.56□□□□□ -1.36
GRIN3BO60391 AC092447.7-201ENST00000422212 1621 ntBASIC6.56□□□□□ -1.36
GRIN3BO60391 AC034229.2-201ENST00000566945 2508 ntBASIC6.56□□□□□ -1.36
GRIN3BO60391 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
GRIN3BO60391 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
GRIN3BO60391 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
GRIN3BO60391 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
GRIN3BO60391 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
GRIN3BO60391 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
GRIN3BO60391 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
GRIN3BO60391 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.56□□□□□ -1.36
GRIN3BO60391 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
GRIN3BO60391 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
GRIN3BO60391 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
GRIN3BO60391 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.55□□□□□ -1.36
GRIN3BO60391 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC6.55□□□□□ -1.36
GRIN3BO60391 MFSD8-239ENST00000641590 2479 ntBASIC6.55□□□□□ -1.36
GRIN3BO60391 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
GRIN3BO60391 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
GRIN3BO60391 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
GRIN3BO60391 RNA5SP515-201ENST00000364570 118 ntBASIC6.55□□□□□ -1.36
GRIN3BO60391 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC6.55□□□□□ -1.36
GRIN3BO60391 HSPA8P15-201ENST00000401676 786 ntBASIC6.55□□□□□ -1.36
GRIN3BO60391 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC6.55□□□□□ -1.36
GRIN3BO60391 RPL7P57-201ENST00000423238 740 ntBASIC6.55□□□□□ -1.36
GRIN3BO60391 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.55□□□□□ -1.36
GRIN3BO60391 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.55□□□□□ -1.36
GRIN3BO60391 AC093155.1-201ENST00000440164 826 ntBASIC6.55□□□□□ -1.36
GRIN3BO60391 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.55□□□□□ -1.36
GRIN3BO60391 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC6.55□□□□□ -1.36
GRIN3BO60391 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC6.55□□□□□ -1.36
GRIN3BO60391 AC023271.1-201ENST00000445936 1090 ntBASIC6.55□□□□□ -1.36
GRIN3BO60391 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
GRIN3BO60391 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC6.55□□□□□ -1.36
GRIN3BO60391 RPS4XP12-201ENST00000461747 709 ntBASIC6.55□□□□□ -1.36
GRIN3BO60391 RN7SL244P-201ENST00000493405 297 ntBASIC6.55□□□□□ -1.36
GRIN3BO60391 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.55□□□□□ -1.36
GRIN3BO60391 AK3P4-201ENST00000504283 583 ntBASIC6.55□□□□□ -1.36
GRIN3BO60391 MTND2P33-201ENST00000506452 1031 ntBASIC6.55□□□□□ -1.36
GRIN3BO60391 AC090071.1-201ENST00000507713 644 ntBASIC6.55□□□□□ -1.36
GRIN3BO60391 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC6.55□□□□□ -1.36
GRIN3BO60391 AC008549.1-201ENST00000512900 643 ntBASIC6.55□□□□□ -1.36
GRIN3BO60391 AP001207.1-201ENST00000524051 481 ntBASIC6.55□□□□□ -1.36
GRIN3BO60391 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC6.55□□□□□ -1.36
GRIN3BO60391 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.55□□□□□ -1.36
GRIN3BO60391 AP005262.1-201ENST00000582646 997 ntBASIC6.55□□□□□ -1.36
GRIN3BO60391 AC093227.2-201ENST00000589357 285 ntBASIC6.55□□□□□ -1.36
GRIN3BO60391 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
GRIN3BO60391 AC068276.1-201ENST00000605793 379 ntBASIC6.55□□□□□ -1.36
GRIN3BO60391 AC106028.5-201ENST00000610332 395 ntBASIC6.55□□□□□ -1.36
GRIN3BO60391 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
GRIN3BO60391 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC6.55□□□□□ -1.36
GRIN3BO60391 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.55□□□□□ -1.36
GRIN3BO60391 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
GRIN3BO60391 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
GRIN3BO60391 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
GRIN3BO60391 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
GRIN3BO60391 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.55□□□□□ -1.36
GRIN3BO60391 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.54□□□□□ -1.36
GRIN3BO60391 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
GRIN3BO60391 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
GRIN3BO60391 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
GRIN3BO60391 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
GRIN3BO60391 Y_RNA.408-201ENST00000383987 102 ntBASIC6.54□□□□□ -1.36
GRIN3BO60391 RNU6-1263P-201ENST00000384601 106 ntBASIC6.54□□□□□ -1.36
GRIN3BO60391 AL133264.1-201ENST00000407157 562 ntBASIC6.54□□□□□ -1.36
GRIN3BO60391 RNU2-66P-201ENST00000410650 161 ntBASIC6.54□□□□□ -1.36
GRIN3BO60391 RN7SKP33-201ENST00000410942 340 ntBASIC6.54□□□□□ -1.36
GRIN3BO60391 PIGPP2-201ENST00000411569 458 ntBASIC6.54□□□□□ -1.36
GRIN3BO60391 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.54□□□□□ -1.36
GRIN3BO60391 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
GRIN3BO60391 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.54□□□□□ -1.36
GRIN3BO60391 KNOP1P3-201ENST00000446933 426 ntBASIC6.54□□□□□ -1.36
GRIN3BO60391 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.54□□□□□ -1.36
GRIN3BO60391 TPT1P7-201ENST00000458300 517 ntBASIC6.54□□□□□ -1.36
GRIN3BO60391 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.54□□□□□ -1.36
GRIN3BO60391 RPL7AP10-201ENST00000481016 791 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms