Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC016397.1-201ENST00000412463 242 ntBASIC4.36□□□□□ -1.71
SSX4O60224 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.36□□□□□ -1.71
SSX4O60224 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.36□□□□□ -1.71
SSX4O60224 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.36□□□□□ -1.71
SSX4O60224 AL807761.1-201ENST00000417622 171 ntBASIC4.36□□□□□ -1.71
SSX4O60224 AC004448.2-201ENST00000422360 586 ntBASIC4.36□□□□□ -1.71
SSX4O60224 AL009174.1-201ENST00000426577 416 ntBASIC4.36□□□□□ -1.71
SSX4O60224 GTF2IP3-201ENST00000433887 494 ntBASIC4.36□□□□□ -1.71
SSX4O60224 AL161722.2-201ENST00000434731 981 ntBASIC4.36□□□□□ -1.71
SSX4O60224 AL353597.2-202ENST00000434901 373 ntBASIC4.36□□□□□ -1.71
SSX4O60224 AL031313.1-201ENST00000448435 256 ntBASIC4.36□□□□□ -1.71
SSX4O60224 AC239809.1-201ENST00000450470 217 ntBASIC4.36□□□□□ -1.71
SSX4O60224 APOOP2-201ENST00000461561 539 ntBASIC4.36□□□□□ -1.71
SSX4O60224 RN7SL738P-201ENST00000470264 297 ntBASIC4.36□□□□□ -1.71
SSX4O60224 PRDX3P4-201ENST00000470828 747 ntBASIC4.36□□□□□ -1.71
SSX4O60224 AC113430.1-201ENST00000506872 718 ntBASIC4.36□□□□□ -1.71
SSX4O60224 AC010460.2-201ENST00000509054 677 ntBASIC4.36□□□□□ -1.71
SSX4O60224 AC006427.1-201ENST00000514359 712 ntBASIC4.36□□□□□ -1.71
SSX4O60224 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.36□□□□□ -1.71
SSX4O60224 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.36□□□□□ -1.71
SSX4O60224 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.36□□□□□ -1.71
SSX4O60224 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSX4O60224 AP001372.4-201ENST00000524889 472 ntBASIC4.36□□□□□ -1.71
SSX4O60224 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSX4O60224 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSX4O60224 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.36□□□□□ -1.71
SSX4O60224 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.36□□□□□ -1.71
SSX4O60224 AL442163.2-201ENST00000553912 710 ntBASIC4.36□□□□□ -1.71
SSX4O60224 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.36□□□□□ -1.71
SSX4O60224 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.36□□□□□ -1.71
SSX4O60224 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.36□□□□□ -1.71
SSX4O60224 MTCO2P2-201ENST00000591258 225 ntBASIC4.36□□□□□ -1.71
SSX4O60224 AL160237.3-201ENST00000604114 1013 ntBASIC4.36□□□□□ -1.71
SSX4O60224 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.36□□□□□ -1.71
SSX4O60224 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.36□□□□□ -1.71
SSX4O60224 AL353726.1-201ENST00000614041 1000 ntBASIC4.36□□□□□ -1.71
SSX4O60224 AC123768.4-201ENST00000616244 701 ntBASIC4.36□□□□□ -1.71
SSX4O60224 AC087385.3-201ENST00000620477 187 ntBASIC4.36□□□□□ -1.71
SSX4O60224 AC015804.1-201ENST00000622935 435 ntBASIC4.36□□□□□ -1.71
SSX4O60224 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.36□□□□□ -1.71
SSX4O60224 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SSX4O60224 AC138393.1-206ENST00000540997 1886 ntBASIC4.36□□□□□ -1.71
SSX4O60224 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSX4O60224 A2MP1-204ENST00000566278 4130 ntBASIC4.36□□□□□ -1.71
SSX4O60224 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSX4O60224 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSX4O60224 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.36□□□□□ -1.71
SSX4O60224 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSX4O60224 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SSX4O60224 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSX4O60224 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SSX4O60224 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SSX4O60224 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSX4O60224 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.35□□□□□ -1.71
SSX4O60224 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSX4O60224 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSX4O60224 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SSX4O60224 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.35□□□□□ -1.71
SSX4O60224 ZNF29P-201ENST00000225587 168 ntBASIC4.35□□□□□ -1.71
SSX4O60224 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SSX4O60224 RN7SKP95-201ENST00000362860 303 ntBASIC4.35□□□□□ -1.71
SSX4O60224 RNU1-20P-201ENST00000363314 162 ntBASIC4.35□□□□□ -1.71
SSX4O60224 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.35□□□□□ -1.71
SSX4O60224 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SSX4O60224 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSX4O60224 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SSX4O60224 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSX4O60224 RN7SKP114-201ENST00000410327 279 ntBASIC4.35□□□□□ -1.71
SSX4O60224 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.35□□□□□ -1.71
SSX4O60224 AC027644.1-201ENST00000419595 298 ntBASIC4.35□□□□□ -1.71
SSX4O60224 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX4O60224 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX4O60224 USP9YP9-201ENST00000429406 715 ntBASIC4.35□□□□□ -1.71
SSX4O60224 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.35□□□□□ -1.71
SSX4O60224 GEMIN8P3-201ENST00000445417 720 ntBASIC4.35□□□□□ -1.71
SSX4O60224 RN7SL517P-201ENST00000462240 305 ntBASIC4.35□□□□□ -1.71
SSX4O60224 AC015724.1-201ENST00000478577 156 ntBASIC4.35□□□□□ -1.71
SSX4O60224 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.35□□□□□ -1.71
SSX4O60224 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.35□□□□□ -1.71
SSX4O60224 AC097173.1-201ENST00000505862 819 ntBASIC4.35□□□□□ -1.71
SSX4O60224 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.35□□□□□ -1.71
SSX4O60224 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX4O60224 AC113420.1-201ENST00000507903 571 ntBASIC4.35□□□□□ -1.71
SSX4O60224 STMN1P2-201ENST00000508435 439 ntBASIC4.35□□□□□ -1.71
SSX4O60224 snoZ278.1-201ENST00000517059 112 ntBASIC4.35□□□□□ -1.71
SSX4O60224 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.35□□□□□ -1.71
SSX4O60224 OR7E128P-201ENST00000532736 1024 ntBASIC4.35□□□□□ -1.71
SSX4O60224 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.35□□□□□ -1.71
SSX4O60224 AC008033.2-201ENST00000542626 177 ntBASIC4.35□□□□□ -1.71
SSX4O60224 PDCD5P1-201ENST00000543528 309 ntBASIC4.35□□□□□ -1.71
SSX4O60224 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX4O60224 AC137768.1-201ENST00000549998 553 ntBASIC4.35□□□□□ -1.71
SSX4O60224 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX4O60224 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.35□□□□□ -1.71
SSX4O60224 AC079075.1-201ENST00000559543 878 ntBASIC4.35□□□□□ -1.71
SSX4O60224 HMGB3P26-201ENST00000560051 582 ntBASIC4.35□□□□□ -1.71
SSX4O60224 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX4O60224 AC090312.1-201ENST00000580637 348 ntBASIC4.35□□□□□ -1.71
SSX4O60224 ELOCP28-201ENST00000590044 317 ntBASIC4.35□□□□□ -1.71
SSX4O60224 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms