Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.8□□□□□ -1.64
SMAD6O43541 AC005034.4-201ENST00000603612 899 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 Z82195.1-201ENST00000604558 398 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 AL133507.1-201ENST00000605269 557 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 AC018638.7-201ENST00000605836 1114 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 PART1_2.1-201ENST00000612397 250 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 HULC.1-201ENST00000612720 240 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 AP000346.3-201ENST00000622821 210 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 AC092184.1-201ENST00000625042 715 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.8□□□□□ -1.64
SMAD6O43541 AL031595.2-201ENST00000624215 19071 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SMAD6O43541 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SMAD6O43541 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SMAD6O43541 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SMAD6O43541 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SMAD6O43541 AC092079.1-201ENST00000558620 1985 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SMAD6O43541 VN2R3P-201ENST00000422626 1412 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SMAD6O43541 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SMAD6O43541 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SMAD6O43541 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SMAD6O43541 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SMAD6O43541 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SMAD6O43541 AC091046.3-201ENST00000631455 1574 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SMAD6O43541 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.79□□□□□ -1.64
SMAD6O43541 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SMAD6O43541 RNU6-1242P-201ENST00000391052 103 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 AL590762.2-201ENST00000395798 571 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 AL359643.1-201ENST00000404109 423 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 RNU6-648P-201ENST00000410190 107 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 RNU4-22P-201ENST00000411058 166 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 Y_RNA.625-201ENST00000411256 107 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 AL591848.1-201ENST00000413092 322 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 SEPT2P1-201ENST00000419651 180 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 RPL34P6-201ENST00000432390 345 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.79□□□□□ -1.64
SMAD6O43541 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.79□□□□□ -1.64
SMAD6O43541 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SMAD6O43541 AL138878.2-201ENST00000440581 1241 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.79□□□□□ -1.64
SMAD6O43541 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.79□□□□□ -1.64
SMAD6O43541 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.79□□□□□ -1.64
SMAD6O43541 AC108463.1-201ENST00000450258 347 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 MTCO3P16-201ENST00000454456 754 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 PTGES3P5-201ENST00000455109 434 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.79□□□□□ -1.64
SMAD6O43541 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.79□□□□□ -1.64
SMAD6O43541 AC096741.1-201ENST00000472250 846 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SMAD6O43541 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.79□□□□□ -1.64
SMAD6O43541 AC093752.1-206ENST00000511823 336 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 AC008494.2-201ENST00000514544 370 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SMAD6O43541 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.79□□□□□ -1.64
SMAD6O43541 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.79□□□□□ -1.64
SMAD6O43541 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.79□□□□□ -1.64
SMAD6O43541 LRRC6P1-201ENST00000532188 885 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.79□□□□□ -1.64
SMAD6O43541 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.79□□□□□ -1.64
SMAD6O43541 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.79□□□□□ -1.64
SMAD6O43541 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.79□□□□□ -1.64
SMAD6O43541 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.79□□□□□ -1.64
SMAD6O43541 AC025918.2-201ENST00000558683 763 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 AC018552.3-201ENST00000567416 561 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.79□□□□□ -1.64
SMAD6O43541 AC007599.1-201ENST00000568688 1174 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.79□□□□□ -1.64
SMAD6O43541 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.79□□□□□ -1.64
SMAD6O43541 RN7SL435P-201ENST00000584418 282 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.79□□□□□ -1.64
SMAD6O43541 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.79□□□□□ -1.64
SMAD6O43541 AC234771.5-201ENST00000600161 514 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 AC008745.1-201ENST00000604064 271 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 AC025175.1-201ENST00000606482 759 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 AL592494.3-201ENST00000609485 464 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 AC015922.4-201ENST00000612568 690 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SMAD6O43541 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SMAD6O43541 AP000676.3-201ENST00000623299 569 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 AC104985.3-201ENST00000623479 597 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.79□□□□□ -1.64
SMAD6O43541 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.79□□□□□ -1.64
SMAD6O43541 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SMAD6O43541 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.79□□□□□ -1.64
SMAD6O43541 AL672167.1-204ENST00000641875 3017 ntBASIC4.79□□□□□ -1.64
SMAD6O43541 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SMAD6O43541 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.79□□□□□ -1.64
SMAD6O43541 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.79□□□□□ -1.64
SMAD6O43541 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SMAD6O43541 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SMAD6O43541 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SMAD6O43541 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SMAD6O43541 UBBP2-201ENST00000376781 231 ntBASIC4.78□□□□□ -1.64
SMAD6O43541 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.78□□□□□ -1.64
SMAD6O43541 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SMAD6O43541 AL445183.3-201ENST00000414168 502 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms