Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AF213884.1-201ENST00000488102 463 ntBASIC4.58□□□□□ -1.68
CLDN3O15551 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN3O15551 IGBP1P5-201ENST00000507524 1000 ntBASIC4.58□□□□□ -1.68
CLDN3O15551 PRELID3BP5-201ENST00000508612 460 ntBASIC4.58□□□□□ -1.68
CLDN3O15551 RNU6-1004P-201ENST00000516584 111 ntBASIC4.58□□□□□ -1.68
CLDN3O15551 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.58□□□□□ -1.68
CLDN3O15551 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN3O15551 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN3O15551 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.58□□□□□ -1.68
CLDN3O15551 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN3O15551 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN3O15551 SNX18P1Y-201ENST00000616231 511 ntBASIC4.58□□□□□ -1.68
CLDN3O15551 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN3O15551 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN3O15551 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CLDN3O15551 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN3O15551 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN3O15551 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN3O15551 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN3O15551 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN3O15551 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN3O15551 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN3O15551 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN3O15551 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN3O15551 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN3O15551 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.57□□□□□ -1.68
CLDN3O15551 RNA5SP52-201ENST00000362448 134 ntBASIC4.57□□□□□ -1.68
CLDN3O15551 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CLDN3O15551 RPS24P12-201ENST00000402084 394 ntBASIC4.57□□□□□ -1.68
CLDN3O15551 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN3O15551 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN3O15551 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN3O15551 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.57□□□□□ -1.68
CLDN3O15551 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN3O15551 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN3O15551 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN3O15551 AC114878.1-201ENST00000441166 358 ntBASIC4.57□□□□□ -1.68
CLDN3O15551 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.57□□□□□ -1.68
CLDN3O15551 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN3O15551 HMGB1P26-201ENST00000452520 628 ntBASIC4.57□□□□□ -1.68
CLDN3O15551 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN3O15551 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN3O15551 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN3O15551 HMGB1P46-201ENST00000520062 610 ntBASIC4.57□□□□□ -1.68
CLDN3O15551 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN3O15551 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.57□□□□□ -1.68
CLDN3O15551 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN3O15551 AL049870.4-201ENST00000555741 486 ntBASIC4.57□□□□□ -1.68
CLDN3O15551 AC012414.2-201ENST00000559474 187 ntBASIC4.57□□□□□ -1.68
CLDN3O15551 HMGB3P26-201ENST00000560051 582 ntBASIC4.57□□□□□ -1.68
CLDN3O15551 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN3O15551 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN3O15551 AC233280.2-201ENST00000603917 1070 ntBASIC4.57□□□□□ -1.68
CLDN3O15551 AC007390.2-201ENST00000606229 3803 ntBASIC4.57□□□□□ -1.68
CLDN3O15551 AC055764.2-201ENST00000610089 670 ntBASIC4.57□□□□□ -1.68
CLDN3O15551 AC090506.2-201ENST00000624521 419 ntBASIC4.57□□□□□ -1.68
CLDN3O15551 AC016717.3-201ENST00000624730 554 ntBASIC4.57□□□□□ -1.68
CLDN3O15551 AC116563.2-201ENST00000624751 535 ntBASIC4.57□□□□□ -1.68
CLDN3O15551 MIR492-201ENST00000638676 116 ntBASIC4.57□□□□□ -1.68
CLDN3O15551 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN3O15551 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN3O15551 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN3O15551 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN3O15551 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
CLDN3O15551 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CLDN3O15551 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN3O15551 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
CLDN3O15551 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN3O15551 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN3O15551 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN3O15551 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
CLDN3O15551 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN3O15551 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CLDN3O15551 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN3O15551 RNU6-984P-201ENST00000363236 109 ntBASIC4.56□□□□□ -1.68
CLDN3O15551 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN3O15551 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN3O15551 HSPD1P16-201ENST00000402302 394 ntBASIC4.56□□□□□ -1.68
CLDN3O15551 RN7SKP33-201ENST00000410942 340 ntBASIC4.56□□□□□ -1.68
CLDN3O15551 AC013404.1-201ENST00000413068 249 ntBASIC4.56□□□□□ -1.68
CLDN3O15551 AC108032.1-201ENST00000416706 207 ntBASIC4.56□□□□□ -1.68
CLDN3O15551 MTND2P21-201ENST00000436242 1042 ntBASIC4.56□□□□□ -1.68
CLDN3O15551 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.56□□□□□ -1.68
CLDN3O15551 AC073587.1-201ENST00000447093 876 ntBASIC4.56□□□□□ -1.68
CLDN3O15551 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN3O15551 IFNWP4-201ENST00000453148 294 ntBASIC4.56□□□□□ -1.68
CLDN3O15551 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN3O15551 RPL7AP28-201ENST00000464513 571 ntBASIC4.56□□□□□ -1.68
CLDN3O15551 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.56□□□□□ -1.68
CLDN3O15551 SUMO1P1-201ENST00000497904 306 ntBASIC4.56□□□□□ -1.68
CLDN3O15551 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN3O15551 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN3O15551 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN3O15551 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN3O15551 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CLDN3O15551 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN3O15551 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN3O15551 CYP4A43P-201ENST00000568156 121 ntBASIC4.56□□□□□ -1.68
CLDN3O15551 AC022655.2-201ENST00000577280 318 ntBASIC4.56□□□□□ -1.68
CLDN3O15551 RN7SL600P-201ENST00000581811 299 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms