Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.34□□□□□ -1.39
SOX1O00570 PRPF38AP2-201ENST00000438179 851 ntBASIC6.34□□□□□ -1.39
SOX1O00570 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.34□□□□□ -1.39
SOX1O00570 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC6.34□□□□□ -1.39
SOX1O00570 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SOX1O00570 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC6.34□□□□□ -1.39
SOX1O00570 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC6.34□□□□□ -1.39
SOX1O00570 AL161747.1-201ENST00000480068 358 ntBASIC6.34□□□□□ -1.39
SOX1O00570 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.34□□□□□ -1.39
SOX1O00570 AC091965.3-201ENST00000506236 208 ntBASIC6.34□□□□□ -1.39
SOX1O00570 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.34□□□□□ -1.39
SOX1O00570 AP003467.2-201ENST00000520175 319 ntBASIC6.34□□□□□ -1.39
SOX1O00570 AP003072.1-201ENST00000531740 145 ntBASIC6.34□□□□□ -1.39
SOX1O00570 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.34□□□□□ -1.39
SOX1O00570 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.34□□□□□ -1.39
SOX1O00570 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC6.34□□□□□ -1.39
SOX1O00570 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.34□□□□□ -1.39
SOX1O00570 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.34□□□□□ -1.39
SOX1O00570 BNIP3P22-201ENST00000593399 556 ntBASIC6.34□□□□□ -1.39
SOX1O00570 LLPHP1-201ENST00000603571 367 ntBASIC6.34□□□□□ -1.39
SOX1O00570 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC6.34□□□□□ -1.39
SOX1O00570 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC6.34□□□□□ -1.39
SOX1O00570 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.34□□□□□ -1.39
SOX1O00570 MIR6758-201ENST00000620653 63 ntBASIC6.34□□□□□ -1.39
SOX1O00570 AC131009.3-201ENST00000621809 287 ntBASIC6.34□□□□□ -1.39
SOX1O00570 AL160413.1-201ENST00000622780 310 ntBASIC6.34□□□□□ -1.39
SOX1O00570 AC130448.2-201ENST00000624082 374 ntBASIC6.34□□□□□ -1.39
SOX1O00570 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.34□□□□□ -1.39
SOX1O00570 AC026634.1-201ENST00000634369 198 ntBASIC6.34□□□□□ -1.39
SOX1O00570 HSPA8P18-201ENST00000439846 1928 ntBASIC6.34□□□□□ -1.39
SOX1O00570 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.34□□□□□ -1.39
SOX1O00570 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.34□□□□□ -1.39
SOX1O00570 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.34□□□□□ -1.39
SOX1O00570 AC022819.1-201ENST00000563495 3910 ntBASIC6.34□□□□□ -1.39
SOX1O00570 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SOX1O00570 AC007996.1-201ENST00000620414 2821 ntBASIC6.34□□□□□ -1.4
SOX1O00570 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SOX1O00570 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.34□□□□□ -1.4
SOX1O00570 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SOX1O00570 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SOX1O00570 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.34□□□□□ -1.4
SOX1O00570 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SOX1O00570 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SOX1O00570 OR4G11P-202ENST00000642116 1414 ntBASIC6.33□□□□□ -1.4
SOX1O00570 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
SOX1O00570 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SOX1O00570 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SOX1O00570 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
SOX1O00570 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.33□□□□□ -1.4
SOX1O00570 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.33□□□□□ -1.4
SOX1O00570 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SOX1O00570 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.33□□□□□ -1.4
SOX1O00570 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SOX1O00570 AL359195.2-201ENST00000623657 4412 ntBASIC6.33□□□□□ -1.4
SOX1O00570 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SOX1O00570 Y_RNA.86-201ENST00000363020 111 ntBASIC6.33□□□□□ -1.4
SOX1O00570 RNU105B-201ENST00000364478 208 ntBASIC6.33□□□□□ -1.4
SOX1O00570 RNVU1-6-201ENST00000364688 164 ntBASIC6.33□□□□□ -1.4
SOX1O00570 RNU6-767P-201ENST00000384132 107 ntBASIC6.33□□□□□ -1.4
SOX1O00570 RNU6-809P-201ENST00000384461 107 ntBASIC6.33□□□□□ -1.4
SOX1O00570 AL034374.1-201ENST00000406329 351 ntBASIC6.33□□□□□ -1.4
SOX1O00570 VN1R8P-201ENST00000407739 893 ntBASIC6.33□□□□□ -1.4
SOX1O00570 JKAMPP1-201ENST00000413804 919 ntBASIC6.33□□□□□ -1.4
SOX1O00570 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.33□□□□□ -1.4
SOX1O00570 SDCBPP1-201ENST00000440192 890 ntBASIC6.33□□□□□ -1.4
SOX1O00570 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX1O00570 AC079448.1-201ENST00000449377 373 ntBASIC6.33□□□□□ -1.4
SOX1O00570 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC6.33□□□□□ -1.4
SOX1O00570 FRG2FP-204ENST00000453982 852 ntBASIC6.33□□□□□ -1.4
SOX1O00570 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX1O00570 C1DP4-201ENST00000455429 424 ntBASIC6.33□□□□□ -1.4
SOX1O00570 AC103987.1-201ENST00000473394 348 ntBASIC6.33□□□□□ -1.4
SOX1O00570 RPL39P36-201ENST00000490784 156 ntBASIC6.33□□□□□ -1.4
SOX1O00570 NPM1P27-201ENST00000502784 830 ntBASIC6.33□□□□□ -1.4
SOX1O00570 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
SOX1O00570 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC6.33□□□□□ -1.4
SOX1O00570 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC6.33□□□□□ -1.4
SOX1O00570 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX1O00570 IGHV3-57-201ENST00000520143 280 ntBASIC6.33□□□□□ -1.4
SOX1O00570 IGKV2D-10-201ENST00000520194 281 ntBASIC6.33□□□□□ -1.4
SOX1O00570 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX1O00570 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX1O00570 GTF2IP11-201ENST00000526931 420 ntBASIC6.33□□□□□ -1.4
SOX1O00570 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC6.33□□□□□ -1.4
SOX1O00570 AP003122.4-201ENST00000530980 758 ntBASIC6.33□□□□□ -1.4
SOX1O00570 AC013828.2-201ENST00000532487 235 ntBASIC6.33□□□□□ -1.4
SOX1O00570 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX1O00570 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.33□□□□□ -1.4
SOX1O00570 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX1O00570 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX1O00570 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX1O00570 AC093519.1-201ENST00000566109 298 ntBASIC6.33□□□□□ -1.4
SOX1O00570 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.33□□□□□ -1.4
SOX1O00570 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.33□□□□□ -1.4
SOX1O00570 AC011712.1-201ENST00000588959 234 ntBASIC6.33□□□□□ -1.4
SOX1O00570 AL162413.1-201ENST00000603198 110 ntBASIC6.33□□□□□ -1.4
SOX1O00570 AC245014.2-201ENST00000603689 287 ntBASIC6.33□□□□□ -1.4
SOX1O00570 AC246785.4-201ENST00000605374 287 ntBASIC6.33□□□□□ -1.4
SOX1O00570 AC141002.1-201ENST00000607025 279 ntBASIC6.33□□□□□ -1.4
SOX1O00570 AC097468.3-201ENST00000607956 456 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms