Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC013470.4-201ENST00000619978 986 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AC011815.3-201ENST00000624194 473 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AC004777.1-201ENST00000624317 287 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AC009039.2-201ENST00000624524 529 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AC020633.1-201ENST00000468439 2247 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AC025574.1-201ENST00000554784 1653 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 SOCS5P3-201ENST00000425115 1576 ntBASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RAI2Q9Y5P3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AL442639.1-201ENST00000625030 1899 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AL672167.1-204ENST00000641875 3017 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AC000374.1-201ENST00000434698 1745 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 RNU6-636P-201ENST00000384598 107 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 RNA5SP171-201ENST00000391071 115 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AP000357.1-201ENST00000409926 1165 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 RSU1P3-201ENST00000412878 835 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AC105402.1-201ENST00000413336 545 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 RPS24P7-201ENST00000416921 246 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AC234781.4-201ENST00000419384 244 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AC246680.2-201ENST00000422106 389 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 CKS1BP6-201ENST00000424932 240 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AC004938.1-201ENST00000438468 308 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 RHEBP2-201ENST00000450289 600 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AL035407.2-201ENST00000454090 378 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AC010326.1-201ENST00000462726 602 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AC011005.3-201ENST00000491624 395 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AC073358.1-201ENST00000505671 684 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 HMGB3P16-201ENST00000508037 287 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 NDUFB4P12-201ENST00000513465 390 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AL121834.1-201ENST00000572284 509 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 MIR4472-2-201ENST00000582069 67 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 MIR4715-201ENST00000584117 79 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 BNIP3P24-201ENST00000593398 557 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 PCNAP1-202ENST00000595299 752 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AC245389.1-201ENST00000605141 529 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AC079416.3-201ENST00000624479 549 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 AC017104.4-201ENST00000636283 1592 ntBASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAI2Q9Y5P3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 CASC19-206ENST00000641028 1430 ntBASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 AL603750.1-201ENST00000624216 1717 ntBASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 IGKV7-3-201ENST00000357453 298 ntBASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 SNORA70.4-201ENST00000365509 134 ntBASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 RNU6-244P-201ENST00000391028 104 ntBASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 ARL4AP5-201ENST00000404372 599 ntBASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 HMGB1P49-201ENST00000418882 569 ntBASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 RPS3AP37-201ENST00000419176 745 ntBASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 PTGES3P1-201ENST00000439531 483 ntBASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 OR8I1P-201ENST00000529291 931 ntBASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 MTND4P33-201ENST00000556706 766 ntBASIC4.8□□□□□ -1.64
RAI2Q9Y5P3 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms