Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.75□□□□□ -1.65
SIX4Q9UIU6 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.75□□□□□ -1.65
SIX4Q9UIU6 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.75□□□□□ -1.65
SIX4Q9UIU6 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.75□□□□□ -1.65
SIX4Q9UIU6 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.75□□□□□ -1.65
SIX4Q9UIU6 LRRC34P1-201ENST00000542742 915 ntBASIC4.75□□□□□ -1.65
SIX4Q9UIU6 AL132857.1-201ENST00000555180 708 ntBASIC4.75□□□□□ -1.65
SIX4Q9UIU6 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.75□□□□□ -1.65
SIX4Q9UIU6 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.75□□□□□ -1.65
SIX4Q9UIU6 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.75□□□□□ -1.65
SIX4Q9UIU6 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.75□□□□□ -1.65
SIX4Q9UIU6 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.75□□□□□ -1.65
SIX4Q9UIU6 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SIX4Q9UIU6 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.75□□□□□ -1.65
SIX4Q9UIU6 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
SIX4Q9UIU6 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SIX4Q9UIU6 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
SIX4Q9UIU6 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SIX4Q9UIU6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SIX4Q9UIU6 AC007342.7-201ENST00000624610 2337 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AC090017.1-201ENST00000548612 1779 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 MIR331-201ENST00000362302 94 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 RNA5SP509-201ENST00000364577 119 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AL583835.1-201ENST00000399570 407 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 RNU4-25P-201ENST00000410569 230 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 SNORA74C-2-201ENST00000411179 201 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 RPL21P108-201ENST00000413857 481 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AC004690.1-201ENST00000418216 328 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 RPS29P17-201ENST00000430795 166 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AC093716.1-201ENST00000435923 377 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 ELOCP11-201ENST00000436690 332 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 CBX1P1-201ENST00000440184 427 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 ELOCP16-201ENST00000444494 332 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AL031313.1-201ENST00000448435 256 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 RN7SL810P-201ENST00000493031 276 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AC021146.5-201ENST00000503544 545 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 HPRT1P1-201ENST00000509498 657 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AC015795.1-201ENST00000513669 327 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 CYCSP28-201ENST00000534284 321 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AC139103.1-201ENST00000534696 1030 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 TRAV8-5-201ENST00000537369 341 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 CYB5AP5-201ENST00000549779 389 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AC027455.1-201ENST00000574104 594 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 RN7SL622P-201ENST00000585292 275 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 ELOCP28-201ENST00000590044 317 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AC019131.2-201ENST00000609071 870 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AL121890.3-201ENST00000618494 516 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AC140113.4-201ENST00000622087 222 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AC011944.2-201ENST00000624440 683 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AC083865.1-201ENST00000636634 831 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 PCAT14-202ENST00000627127 3935 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 HSPD1P11-201ENST00000508643 1702 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 EOGT-210ENST00000615922 1931 ntBASIC4.74□□□□□ -1.65
SIX4Q9UIU6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SIX4Q9UIU6 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AC005332.5-201ENST00000591222 2919 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 RNA5SP307-201ENST00000362863 116 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 BMS1P3-201ENST00000372011 932 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AL603865.2-201ENST00000401679 213 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AL592310.1-201ENST00000414330 671 ntBASIC4.73□□□□□ -1.65
SIX4Q9UIU6 AL590806.1-201ENST00000415818 853 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms