Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC119674.1-207ENST00000641355 633 ntBASIC4.92□□□□□ -1.62
SCN11AQ9UI33 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN11AQ9UI33 HCFC2P1-201ENST00000392864 1592 ntBASIC4.92□□□□□ -1.62
SCN11AQ9UI33 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.92□□□□□ -1.62
SCN11AQ9UI33 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SCN11AQ9UI33 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN11AQ9UI33 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN11AQ9UI33 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
SCN11AQ9UI33 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN11AQ9UI33 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN11AQ9UI33 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SCN11AQ9UI33 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN11AQ9UI33 RPL7P60-201ENST00000397636 735 ntBASIC4.91□□□□□ -1.62
SCN11AQ9UI33 HDGFP1-201ENST00000405943 252 ntBASIC4.91□□□□□ -1.62
SCN11AQ9UI33 HSPD1P21-201ENST00000436541 245 ntBASIC4.91□□□□□ -1.62
SCN11AQ9UI33 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN11AQ9UI33 SETP14-201ENST00000497538 873 ntBASIC4.91□□□□□ -1.62
SCN11AQ9UI33 OR7E13P-201ENST00000526052 910 ntBASIC4.91□□□□□ -1.62
SCN11AQ9UI33 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN11AQ9UI33 AC096553.1-201ENST00000605169 829 ntBASIC4.91□□□□□ -1.62
SCN11AQ9UI33 BNIP3P41-202ENST00000616656 861 ntBASIC4.91□□□□□ -1.62
SCN11AQ9UI33 AC243312.2-201ENST00000623340 601 ntBASIC4.91□□□□□ -1.62
SCN11AQ9UI33 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.91□□□□□ -1.62
SCN11AQ9UI33 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
SCN11AQ9UI33 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SCN11AQ9UI33 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SCN11AQ9UI33 USP8P1-201ENST00000494673 3183 ntBASIC4.91□□□□□ -1.62
SCN11AQ9UI33 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN11AQ9UI33 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.91□□□□□ -1.62
SCN11AQ9UI33 RNU2-65P-201ENST00000410162 185 ntBASIC4.91□□□□□ -1.62
SCN11AQ9UI33 GSTM3P2-201ENST00000412746 530 ntBASIC4.91□□□□□ -1.62
SCN11AQ9UI33 EIF4EP1-201ENST00000422311 642 ntBASIC4.91□□□□□ -1.62
SCN11AQ9UI33 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.91□□□□□ -1.62
SCN11AQ9UI33 CYCSP4-201ENST00000429682 331 ntBASIC4.91□□□□□ -1.62
SCN11AQ9UI33 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN11AQ9UI33 RPL21P11-201ENST00000461458 483 ntBASIC4.91□□□□□ -1.62
SCN11AQ9UI33 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN11AQ9UI33 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.91□□□□□ -1.62
SCN11AQ9UI33 AC022146.1-201ENST00000595307 847 ntBASIC4.91□□□□□ -1.62
SCN11AQ9UI33 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.91□□□□□ -1.62
SCN11AQ9UI33 AC026368.1-201ENST00000614934 690 ntBASIC4.91□□□□□ -1.62
SCN11AQ9UI33 AC024023.1-201ENST00000624530 922 ntBASIC4.91□□□□□ -1.62
SCN11AQ9UI33 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.91□□□□□ -1.62
SCN11AQ9UI33 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCN11AQ9UI33 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SCN11AQ9UI33 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
SCN11AQ9UI33 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SCN11AQ9UI33 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SCN11AQ9UI33 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SCN11AQ9UI33 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.62
SCN11AQ9UI33 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.9□□□□□ -1.63
SCN11AQ9UI33 ZNF602P-201ENST00000405929 924 ntBASIC4.9□□□□□ -1.63
SCN11AQ9UI33 AC087650.1-201ENST00000431445 468 ntBASIC4.9□□□□□ -1.63
SCN11AQ9UI33 PPIAP3-201ENST00000450588 505 ntBASIC4.9□□□□□ -1.63
SCN11AQ9UI33 RN7SL293P-201ENST00000481765 281 ntBASIC4.9□□□□□ -1.63
SCN11AQ9UI33 RN7SL271P-201ENST00000487601 295 ntBASIC4.9□□□□□ -1.63
SCN11AQ9UI33 AC017037.1-201ENST00000508460 471 ntBASIC4.9□□□□□ -1.63
SCN11AQ9UI33 ASNSP4-201ENST00000511103 447 ntBASIC4.9□□□□□ -1.63
SCN11AQ9UI33 SNORA70.18-201ENST00000516696 98 ntBASIC4.9□□□□□ -1.63
SCN11AQ9UI33 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.9□□□□□ -1.63
SCN11AQ9UI33 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SCN11AQ9UI33 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.9□□□□□ -1.63
SCN11AQ9UI33 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.9□□□□□ -1.63
SCN11AQ9UI33 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SCN11AQ9UI33 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
SCN11AQ9UI33 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.9□□□□□ -1.63
SCN11AQ9UI33 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SCN11AQ9UI33 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SCN11AQ9UI33 AP001284.1-201ENST00000528393 2118 ntBASIC4.9□□□□□ -1.63
SCN11AQ9UI33 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SCN11AQ9UI33 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
SCN11AQ9UI33 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SCN11AQ9UI33 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SCN11AQ9UI33 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.89□□□□□ -1.63
SCN11AQ9UI33 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN11AQ9UI33 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SCN11AQ9UI33 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
SCN11AQ9UI33 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.89□□□□□ -1.63
SCN11AQ9UI33 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.89□□□□□ -1.63
SCN11AQ9UI33 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.89□□□□□ -1.63
SCN11AQ9UI33 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.89□□□□□ -1.63
SCN11AQ9UI33 RN7SL585P-201ENST00000470538 280 ntBASIC4.89□□□□□ -1.63
SCN11AQ9UI33 GMPSP1-201ENST00000514075 579 ntBASIC4.89□□□□□ -1.63
SCN11AQ9UI33 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.89□□□□□ -1.63
SCN11AQ9UI33 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.89□□□□□ -1.63
SCN11AQ9UI33 CYP4A43P-201ENST00000568156 121 ntBASIC4.89□□□□□ -1.63
SCN11AQ9UI33 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.89□□□□□ -1.63
SCN11AQ9UI33 AL133247.2-201ENST00000603236 482 ntBASIC4.89□□□□□ -1.63
SCN11AQ9UI33 AC243654.2-201ENST00000612843 443 ntBASIC4.89□□□□□ -1.63
SCN11AQ9UI33 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN11AQ9UI33 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN11AQ9UI33 UBE3AP2-201ENST00000429033 2259 ntBASIC4.89□□□□□ -1.63
SCN11AQ9UI33 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN11AQ9UI33 MAPK10-320ENST00000641462 6696 ntBASIC4.89□□□□□ -1.63
SCN11AQ9UI33 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SCN11AQ9UI33 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SCN11AQ9UI33 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SCN11AQ9UI33 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN11AQ9UI33 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
SCN11AQ9UI33 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms