Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 RNU6-532P-201ENST00000384318 107 ntBASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 RNU6-298P-201ENST00000390888 96 ntBASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 RPS27AP11-201ENST00000402798 447 ntBASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 PTMAP3-201ENST00000447474 330 ntBASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 OFD1P3Y-201ENST00000453312 783 ntBASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 RPL23AP37-201ENST00000479658 549 ntBASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 HMGB1P38-201ENST00000490557 577 ntBASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 MTND2P32-201ENST00000521584 1038 ntBASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 MTND1P24-201ENST00000552175 861 ntBASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 AL049838.1-201ENST00000563647 981 ntBASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 VN1R87P-201ENST00000596706 487 ntBASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 AC115286.1-201ENST00000604298 434 ntBASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 AC013244.3-201ENST00000605614 388 ntBASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 SNORD91B-202ENST00000608459 222 ntBASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 ZNF849P-201ENST00000594711 1566 ntBASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HDAC6Q9UBN7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 RNA5SP479-201ENST00000364858 117 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 RNU6-452P-201ENST00000384406 107 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AL590762.2-201ENST00000395798 571 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 RPS24P12-201ENST00000402084 394 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 RPL5P19-201ENST00000404228 893 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 U3.35-201ENST00000408405 208 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 RN7SKP199-201ENST00000410325 305 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AC010385.1-201ENST00000412374 256 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 MTCO2P17-201ENST00000424336 677 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 DPY19L1P2-201ENST00000426647 915 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AC004975.1-201ENST00000428733 208 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 MED6P1-201ENST00000439659 713 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 CBX1P1-201ENST00000440184 427 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 RRM2P4-201ENST00000441721 562 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 NUTF2P7-201ENST00000453086 375 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AC010618.1-201ENST00000469924 477 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 RN7SL41P-201ENST00000476144 297 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 RPS4XP18-201ENST00000495480 763 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AC007016.1-201ENST00000512110 244 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AF186190.1-201ENST00000517470 480 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 HMGB1P1-201ENST00000522557 636 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AP001372.4-201ENST00000524889 472 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AC023575.1-201ENST00000580510 358 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 RPP40P2-201ENST00000603596 712 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AL133243.1-201ENST00000614487 366 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AL121890.3-201ENST00000618494 516 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AC022079.2-201ENST00000619739 566 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AC005086.4-201ENST00000623065 213 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AC007342.8-201ENST00000623278 678 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AP000770.2-201ENST00000623694 100 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AC011944.2-201ENST00000624440 683 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AC008993.2-201ENST00000631744 806 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 DHX9P1-201ENST00000436565 3076 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 LINC01355-201ENST00000566551 5444 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HDAC6Q9UBN7 ZFRP1-201ENST00000457579 2970 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms