Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 DHX40P1-201ENST00000588725 1412 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 SNORA71.2-201ENST00000364941 134 ntBASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 U6.112-201ENST00000384129 70 ntBASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 SDHCP2-201ENST00000398565 501 ntBASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 RNU6-77P-201ENST00000410554 91 ntBASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 SETP15-201ENST00000412724 337 ntBASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 AL590139.1-201ENST00000416267 400 ntBASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 AL592437.1-201ENST00000443781 492 ntBASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 MTND1P33-201ENST00000446251 917 ntBASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 AL929288.2-201ENST00000446368 407 ntBASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 SEPT14P24-201ENST00000447236 180 ntBASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 SBDSP1-204ENST00000453858 737 ntBASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 SETP1-201ENST00000556014 845 ntBASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 BPIFA4P-203ENST00000603168 689 ntBASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 AC091488.1-201ENST00000604239 660 ntBASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 AC010201.1-201ENST00000605051 540 ntBASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 AC005014.3-201ENST00000605985 190 ntBASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 AL008729.2-201ENST00000606393 473 ntBASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 AC005156.1-201ENST00000613371 573 ntBASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 AC008079.2-201ENST00000623543 20396 ntBASIC5.05□□□□□ -1.6
BLOC1S4Q9NUP1 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 AP001273.1-201ENST00000624493 3152 ntBASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 RNA5SP505-201ENST00000364748 108 ntBASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 RNU1-63P-201ENST00000383902 164 ntBASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 GAPDHP49-201ENST00000421421 961 ntBASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 AC246680.2-201ENST00000422106 389 ntBASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 RPEP3-201ENST00000425462 676 ntBASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 AC013262.1-201ENST00000426710 252 ntBASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 OR51B8P-201ENST00000449892 769 ntBASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 AC233982.1-201ENST00000451247 436 ntBASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 AP000942.1-201ENST00000463969 747 ntBASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 AC073522.1-201ENST00000483312 377 ntBASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 OR5H4P-201ENST00000510851 923 ntBASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 AC090819.1-201ENST00000523800 1111 ntBASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 CYCSP28-201ENST00000534284 321 ntBASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 TMF1P1-201ENST00000576058 373 ntBASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 AC000123.2-201ENST00000623124 461 ntBASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 AC006927.2-201ENST00000639256 389 ntBASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 AC021242.1-201ENST00000507315 2035 ntBASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
BLOC1S4Q9NUP1 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
BLOC1S4Q9NUP1 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.03□□□□□ -1.6
BLOC1S4Q9NUP1 AC139769.1-204ENST00000472297 1931 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms