Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AC120338.1-201ENST00000625074 1541 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 U8.4-201ENST00000363626 134 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 SNORA70-201ENST00000384436 135 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AL079342.2-201ENST00000403367 482 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 GJA6P-201ENST00000415117 1042 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 TBCAP2-201ENST00000416175 326 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 BMS1P13-201ENST00000417301 885 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 RGS17P1-201ENST00000423358 553 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 RPF2P1-201ENST00000424137 906 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 RAC1P8-201ENST00000427086 527 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 CNOT7P1-201ENST00000429006 852 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AL451139.1-201ENST00000434718 346 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AL357520.1-201ENST00000441557 453 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 VN1R25P-201ENST00000443385 738 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 HMGN3P1-201ENST00000453847 193 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 RPS26P39-201ENST00000469206 341 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 RN7SL558P-201ENST00000497468 299 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AC110792.2-201ENST00000510278 224 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 RN7SKP46-201ENST00000515942 234 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 RNU6-311P-201ENST00000516224 102 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 RN7SKP66-201ENST00000516681 231 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 RNU6-709P-201ENST00000517257 104 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AP001207.1-201ENST00000524051 481 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AL390726.5-202ENST00000564800 256 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AGGF1P6-201ENST00000569213 976 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AL450336.1-201ENST00000605180 586 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AC068620.4-201ENST00000636730 1182 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 CASC19-222ENST00000641321 1173 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 LINC01109-201ENST00000603837 3081 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AL139811.1-201ENST00000424779 2299 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 AC000123.3-201ENST00000624029 4975 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 MTCO1P11-201ENST00000429111 1528 ntBASIC4.67□□□□□ -1.66
BRF2Q9HAW0 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.67□□□□□ -1.66
BRF2Q9HAW0 MTND4P10-201ENST00000446199 1363 ntBASIC4.66□□□□□ -1.66
BRF2Q9HAW0 AC011978.2-201ENST00000569835 2054 ntBASIC4.66□□□□□ -1.66
BRF2Q9HAW0 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
BRF2Q9HAW0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
BRF2Q9HAW0 HSPA8P18-201ENST00000439846 1928 ntBASIC4.66□□□□□ -1.66
BRF2Q9HAW0 ERCC6-202ENST00000374127 1782 ntBASIC4.66□□□□□ -1.66
BRF2Q9HAW0 AC000367.1-201ENST00000452711 1766 ntBASIC4.66□□□□□ -1.66
BRF2Q9HAW0 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BRF2Q9HAW0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BRF2Q9HAW0 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
BRF2Q9HAW0 AC016716.1-201ENST00000265882 708 ntBASIC4.66□□□□□ -1.66
BRF2Q9HAW0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
BRF2Q9HAW0 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.66□□□□□ -1.66
BRF2Q9HAW0 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BRF2Q9HAW0 RNU6-444P-201ENST00000383988 108 ntBASIC4.66□□□□□ -1.66
BRF2Q9HAW0 RNU1-106P-201ENST00000384382 164 ntBASIC4.66□□□□□ -1.66
BRF2Q9HAW0 AL450992.3-201ENST00000413192 568 ntBASIC4.66□□□□□ -1.66
BRF2Q9HAW0 GTF2IP5-201ENST00000414608 731 ntBASIC4.66□□□□□ -1.66
BRF2Q9HAW0 AC008280.1-201ENST00000418851 412 ntBASIC4.66□□□□□ -1.66
BRF2Q9HAW0 RPS3AP37-201ENST00000419176 745 ntBASIC4.66□□□□□ -1.66
BRF2Q9HAW0 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
BRF2Q9HAW0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.66□□□□□ -1.66
BRF2Q9HAW0 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms