Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC012146.2-201ENST00000576545 416 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AC105148.1-201ENST00000604961 409 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AL139022.2-201ENST00000606934 443 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AC019131.2-201ENST00000609071 870 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 MIR6768-201ENST00000610734 72 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AC022467.1-201ENST00000614738 749 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 U7.8-201ENST00000619968 63 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 MIR7702-201ENST00000621931 59 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AC090617.9-201ENST00000623751 147 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AL590396.2-201ENST00000636511 1041 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 FP325313.1-201ENST00000638228 703 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 MTCO1P4-201ENST00000520516 1409 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 A2MP1-204ENST00000566278 4130 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AL034403.1-201ENST00000399414 885 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AL035405.1-201ENST00000400795 710 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 TAF9BP2-201ENST00000400856 499 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AL355433.1-201ENST00000422804 300 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 DPY19L1P2-201ENST00000426647 915 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AL512637.2-201ENST00000431287 1256 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 PTP4A1P3-201ENST00000433661 420 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 RPS26P40-201ENST00000435209 294 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 CASP3P1-201ENST00000446037 609 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 MOB1AP2-201ENST00000446060 614 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AL157827.1-201ENST00000447622 132 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 RPL23AP23-201ENST00000452590 471 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AC106872.4-201ENST00000510050 523 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AC068020.1-201ENST00000594215 661 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AL391001.1-201ENST00000602747 715 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 ABI1P1-201ENST00000603375 1120 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 BNIP3P31-201ENST00000604515 566 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AP001033.2-201ENST00000609701 1003 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AC064801.1-201ENST00000612025 407 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 uc_338.32-201ENST00000615087 172 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AC022306.3-201ENST00000619930 550 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AC087385.3-201ENST00000620477 187 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 RPL23AP61-201ENST00000623642 466 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 ZNF90P1-201ENST00000480493 1951 ntBASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC28BQ9BUN5 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 ZNF962P-201ENST00000443465 3140 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 OR11H4-201ENST00000315409 1082 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 RNU6-31P-201ENST00000384388 108 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 ATP5F1P6-201ENST00000402768 767 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 RPL23AP89-201ENST00000439324 255 ntBASIC4.18□□□□□ -1.74
CCDC28BQ9BUN5 AL353898.1-201ENST00000444055 238 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms