Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 SNORA73.1-201ENST00000363107 205 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 MIR92A2-201ENST00000385299 75 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AC093719.1-202ENST00000392735 373 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 RN7SKP247-201ENST00000411094 308 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AL139128.1-201ENST00000413921 941 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AL360081.1-201ENST00000428299 555 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 MOB1AP1-201ENST00000430903 535 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 VN1R54P-201ENST00000435210 1049 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 MTCYBP31-201ENST00000438855 1122 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AL772161.1-201ENST00000439130 476 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AL137845.2-201ENST00000444292 988 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AC112498.1-201ENST00000444401 332 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 MRPL48P1-201ENST00000445390 636 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AC099063.2-201ENST00000446360 662 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 MRPL42P4-201ENST00000453267 443 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 RPL10P17-201ENST00000453852 316 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 HIGD1AP8-201ENST00000453927 274 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 RPL7AP10-201ENST00000481016 791 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AC140172.1-201ENST00000502928 141 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 MTCYBP35-201ENST00000503630 1137 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 BRD9P1-201ENST00000529855 560 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AC023538.1-201ENST00000534576 736 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 GCSHP4-201ENST00000538792 439 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 MIR3936-201ENST00000584304 110 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AC068790.7-201ENST00000602347 528 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AC015914.2-201ENST00000618167 288 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AP002791.1-201ENST00000623291 381 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 SGO1P1-201ENST00000603525 1447 ntBASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 AC027290.2-201ENST00000623210 18662 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 CNOT7P1-201ENST00000429006 852 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 AL049745.1-201ENST00000433953 286 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 AC008072.1-201ENST00000434254 824 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 PRPF38AP2-201ENST00000438179 851 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 AL450023.3-201ENST00000440592 271 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 RPL7AP61-201ENST00000443410 636 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 RPL7L1P1-201ENST00000448259 785 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 RN7SL319P-201ENST00000480656 221 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 BOLA3P3-201ENST00000505182 232 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 COX6B1P5-201ENST00000509843 249 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 RNA5SP249-201ENST00000516127 99 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 AC021006.3-201ENST00000530771 192 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 AC023050.2-201ENST00000544968 387 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 AC090695.1-201ENST00000561269 1222 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 AC233702.9-201ENST00000581528 203 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 AC069366.1-201ENST00000583159 838 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 AP001269.3-201ENST00000588718 329 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 AC107952.2-201ENST00000606048 486 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 AL355816.1-201ENST00000607951 118 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 AP005137.2-201ENST00000609238 400 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 MIR6748-201ENST00000610433 71 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 AL136295.6-201ENST00000610486 658 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 MFSD8-245ENST00000641743 948 ntBASIC5.9□□□□□ -1.46
CHMP4CQ96CF2 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.9□□□□□ -1.47
CHMP4CQ96CF2 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms