Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 CR392039.4-201ENST00000624968 501 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 OR2L1P-202ENST00000641567 1023 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AP005901.5-201ENST00000545779 1796 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AC010928.1-201ENST00000592477 1447 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 CASC19-204ENST00000641001 2055 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AL355852.1-201ENST00000454081 1771 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 NACA3P-201ENST00000359690 648 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AL035079.1-201ENST00000405210 287 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 RNU2-65P-201ENST00000410162 185 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AC107081.1-201ENST00000414975 361 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AC099336.2-201ENST00000422457 254 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 OR2B7P-201ENST00000429302 934 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 MTCO1P3-201ENST00000429327 192 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 NRBF2P3-201ENST00000432731 865 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 ACTR3P2-201ENST00000439585 1257 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AC004980.3-201ENST00000447046 365 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 BX842559.2-201ENST00000451418 605 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AC099560.2-201ENST00000457554 255 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 RPL23AP56-201ENST00000460778 453 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AC010326.1-201ENST00000462726 602 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AC004263.1-201ENST00000479327 332 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AC091951.3-201ENST00000504093 246 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 RN7SKP92-201ENST00000517266 244 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 OR4C2P-201ENST00000530855 1064 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 MIR3912-201ENST00000577566 105 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 MIR4284-201ENST00000578924 81 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AC010503.3-201ENST00000594355 540 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 PCNAP1-202ENST00000595299 752 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AL355816.1-201ENST00000607951 118 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 MIR6853-201ENST00000619642 74 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HMGB4Q8WW32 AL353743.4-201ENST00000422653 1547 ntBASIC4.97□□□□□ -1.61
HMGB4Q8WW32 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
HMGB4Q8WW32 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
HMGB4Q8WW32 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
HMGB4Q8WW32 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.96□□□□□ -1.61
HMGB4Q8WW32 Z95331.1-201ENST00000623075 23112 ntBASIC4.96□□□□□ -1.61
HMGB4Q8WW32 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.96□□□□□ -1.61
HMGB4Q8WW32 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 ECM1P2-201ENST00000503354 1577 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AC026951.1-201ENST00000559530 2459 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 OR1L6-202ENST00000373684 1044 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AL590084.1-201ENST00000407885 387 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 RN7SKP106-201ENST00000410832 272 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AC002524.1-201ENST00000411687 547 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 BX510359.2-201ENST00000417920 305 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 CENPIP1-201ENST00000425713 902 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 NPM1P24-201ENST00000428039 894 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 HIGD1AP4-201ENST00000430194 280 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 HMGB1P16-201ENST00000447155 540 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.96□□□□□ -1.62
HMGB4Q8WW32 AC090804.1-201ENST00000448870 490 ntBASIC4.96□□□□□ -1.62
HMGB4Q8WW32 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms