Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SHKBP1Q8TBC3 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SHKBP1Q8TBC3 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AC009831.5-201ENST00000624000 3189 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AL161901.1-201ENST00000624954 3425 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 SHQ1P1-201ENST00000437111 1544 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 RNU6-543P-201ENST00000362576 108 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 Y_RNA.166-201ENST00000363730 102 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AP000357.1-201ENST00000409926 1165 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AC127526.2-201ENST00000426436 775 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AL445928.1-201ENST00000435545 222 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 HMGB1P45-201ENST00000435986 653 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 RPS7P3-201ENST00000443360 580 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AC112187.1-201ENST00000455837 479 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AC090589.1-201ENST00000473109 362 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 RPS4XP14-201ENST00000493072 781 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 NIFKP7-201ENST00000503365 834 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AC105029.1-201ENST00000520250 669 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AC109635.6-201ENST00000525487 1113 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AP005597.4-201ENST00000526762 229 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AC022404.1-201ENST00000555320 273 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AC006116.10-201ENST00000591836 581 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AL390838.2-201ENST00000602394 274 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 PARP4P2-201ENST00000446672 3326 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AL355834.1-201ENST00000556602 3965 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AC117409.1-201ENST00000470499 1310 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 AOX3P-204ENST00000491025 2107 ntBASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHKBP1Q8TBC3 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SHKBP1Q8TBC3 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
SHKBP1Q8TBC3 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.21□□□□□ -1.41
SHKBP1Q8TBC3 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
SHKBP1Q8TBC3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
SHKBP1Q8TBC3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 HMGB1P5-201ENST00000255320 642 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 ENSAP3-201ENST00000312710 333 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 RNU5D-1-201ENST00000363299 116 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 OR4K12P-201ENST00000406538 961 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 MIR1284-201ENST00000408337 120 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 RNU2-42P-201ENST00000410697 113 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 RPS3AP3-201ENST00000411933 242 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 AC109780.2-201ENST00000413467 845 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 JKAMPP1-201ENST00000413804 919 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 RPS27AP14-201ENST00000422868 454 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 USP9YP36-201ENST00000424581 829 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 AC104164.1-201ENST00000460282 590 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 AC012170.1-201ENST00000495139 359 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 AC017037.1-201ENST00000508460 471 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 HMGN2P36-201ENST00000529541 409 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms