Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SCOCP1-201ENST00000554676 349 ntBASIC5.63□□□□□ -1.51
ATG4DQ86TL0 AC006270.2-201ENST00000578523 652 ntBASIC5.63□□□□□ -1.51
ATG4DQ86TL0 RN7SL230P-201ENST00000580835 303 ntBASIC5.63□□□□□ -1.51
ATG4DQ86TL0 HMGN1P30-201ENST00000589286 268 ntBASIC5.63□□□□□ -1.51
ATG4DQ86TL0 AC020916.2-201ENST00000591242 360 ntBASIC5.63□□□□□ -1.51
ATG4DQ86TL0 AC009597.2-201ENST00000604659 592 ntBASIC5.63□□□□□ -1.51
ATG4DQ86TL0 RPSAP75-201ENST00000605848 301 ntBASIC5.63□□□□□ -1.51
ATG4DQ86TL0 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.63□□□□□ -1.51
ATG4DQ86TL0 AL137067.2-201ENST00000621202 131 ntBASIC5.63□□□□□ -1.51
ATG4DQ86TL0 AC091925.1-201ENST00000623204 462 ntBASIC5.63□□□□□ -1.51
ATG4DQ86TL0 AL732618.1-201ENST00000623251 301 ntBASIC5.63□□□□□ -1.51
ATG4DQ86TL0 AC073592.6-201ENST00000624271 415 ntBASIC5.63□□□□□ -1.51
ATG4DQ86TL0 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4DQ86TL0 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.63□□□□□ -1.51
ATG4DQ86TL0 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4DQ86TL0 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4DQ86TL0 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.63□□□□□ -1.51
ATG4DQ86TL0 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4DQ86TL0 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.63□□□□□ -1.51
ATG4DQ86TL0 CAP1P2-201ENST00000417455 1409 ntBASIC5.63□□□□□ -1.51
ATG4DQ86TL0 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
ATG4DQ86TL0 AP001157.1-201ENST00000550837 2339 ntBASIC5.63□□□□□ -1.51
ATG4DQ86TL0 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4DQ86TL0 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.63□□□□□ -1.51
ATG4DQ86TL0 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATG4DQ86TL0 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 CKAP2P1-201ENST00000555477 2049 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AC005294.1-201ENST00000355509 281 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 RNU6-462P-201ENST00000362659 105 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 Y_RNA.159-201ENST00000363674 87 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 SNORA22B-201ENST00000383876 138 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 RNU6-74P-201ENST00000384235 107 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 MIR188-201ENST00000385034 86 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 MIR16-1-201ENST00000385271 89 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AL356967.1-201ENST00000406305 431 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 RNA5SP198-201ENST00000410376 127 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 RNU6-1068P-201ENST00000410958 103 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AL139128.1-201ENST00000413921 941 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AC015977.1-201ENST00000418887 292 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AL645937.1-202ENST00000421799 937 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AC016027.5-201ENST00000427227 210 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AL354707.3-201ENST00000427308 331 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AC108479.1-201ENST00000431142 427 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 RPL5P25-201ENST00000441148 775 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 RPSAP40-201ENST00000442343 891 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 HIGD1AP16-201ENST00000450986 258 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 MTND1P9-201ENST00000453775 944 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 CDH12P2-201ENST00000504393 298 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 HMGB1P28-201ENST00000507778 552 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AC108120.2-201ENST00000512973 294 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 ZNF519P4-201ENST00000514008 125 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 RNA5SP116-201ENST00000516132 98 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 RNU6-445P-201ENST00000516949 107 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 Y_RNA.710-201ENST00000516975 110 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 BTF3P12-201ENST00000519620 469 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AC084121.1-201ENST00000533882 835 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AC007494.1-201ENST00000562293 760 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 NRBF2P1-201ENST00000587407 859 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AC103710.3-201ENST00000608157 948 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AC104237.2-201ENST00000612456 443 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AC005899.7-201ENST00000618199 588 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AC040168.1-201ENST00000623594 991 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms