Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 Z95327.2-201ENST00000414579 1873 ntBASIC4.03□□□□□ -1.76
CXCL12P48061 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
CXCL12P48061 AP001642.1-201ENST00000624727 2117 ntBASIC4.03□□□□□ -1.76
CXCL12P48061 SNORD35B-201ENST00000363660 87 ntBASIC4.03□□□□□ -1.76
CXCL12P48061 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.03□□□□□ -1.76
CXCL12P48061 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CXCL12P48061 ATP5F1P4-201ENST00000397288 746 ntBASIC4.03□□□□□ -1.76
CXCL12P48061 CTSL3P-202ENST00000412179 788 ntBASIC4.03□□□□□ -1.76
CXCL12P48061 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.03□□□□□ -1.76
CXCL12P48061 RPS29P4-201ENST00000414733 161 ntBASIC4.03□□□□□ -1.76
CXCL12P48061 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.03□□□□□ -1.76
CXCL12P48061 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.03□□□□□ -1.76
CXCL12P48061 CAB39P1-201ENST00000502277 460 ntBASIC4.03□□□□□ -1.76
CXCL12P48061 AP001960.1-201ENST00000506494 658 ntBASIC4.03□□□□□ -1.76
CXCL12P48061 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.03□□□□□ -1.76
CXCL12P48061 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.03□□□□□ -1.76
CXCL12P48061 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.03□□□□□ -1.76
CXCL12P48061 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.03□□□□□ -1.76
CXCL12P48061 RPL23AP87-202ENST00000573039 466 ntBASIC4.03□□□□□ -1.76
CXCL12P48061 AC012417.1-201ENST00000582307 1039 ntBASIC4.03□□□□□ -1.76
CXCL12P48061 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.03□□□□□ -1.76
CXCL12P48061 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.03□□□□□ -1.76
CXCL12P48061 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.03□□□□□ -1.76
CXCL12P48061 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.03□□□□□ -1.76
CXCL12P48061 AL451044.1-201ENST00000604867 238 ntBASIC4.03□□□□□ -1.76
CXCL12P48061 AC091167.4-201ENST00000605079 184 ntBASIC4.03□□□□□ -1.76
CXCL12P48061 IMMP1LP1-201ENST00000605170 488 ntBASIC4.03□□□□□ -1.76
CXCL12P48061 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.03□□□□□ -1.76
CXCL12P48061 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.03□□□□□ -1.76
CXCL12P48061 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CXCL12P48061 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.03□□□□□ -1.76
CXCL12P48061 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CXCL12P48061 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.03□□□□□ -1.76
CXCL12P48061 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CXCL12P48061 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
CXCL12P48061 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
CXCL12P48061 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
CXCL12P48061 NAMPTP1-201ENST00000440465 2514 ntBASIC4.02□□□□□ -1.77
CXCL12P48061 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL12P48061 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.02□□□□□ -1.77
CXCL12P48061 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CXCL12P48061 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.02□□□□□ -1.77
CXCL12P48061 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL12P48061 MIR137-201ENST00000385223 102 ntBASIC4.02□□□□□ -1.77
CXCL12P48061 ZNF602P-201ENST00000405929 924 ntBASIC4.02□□□□□ -1.77
CXCL12P48061 SYF2P2-201ENST00000417620 583 ntBASIC4.02□□□□□ -1.77
CXCL12P48061 UBTFL3-201ENST00000418934 1024 ntBASIC4.02□□□□□ -1.77
CXCL12P48061 Z97055.1-201ENST00000419730 712 ntBASIC4.02□□□□□ -1.77
CXCL12P48061 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.02□□□□□ -1.77
CXCL12P48061 AL355994.1-201ENST00000424379 260 ntBASIC4.02□□□□□ -1.77
CXCL12P48061 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.02□□□□□ -1.77
CXCL12P48061 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.02□□□□□ -1.77
CXCL12P48061 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.02□□□□□ -1.77
CXCL12P48061 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL12P48061 RPS27AP15-201ENST00000447672 466 ntBASIC4.02□□□□□ -1.77
CXCL12P48061 AC104306.1-201ENST00000449702 371 ntBASIC4.02□□□□□ -1.77
CXCL12P48061 CYCSP53-201ENST00000455540 265 ntBASIC4.02□□□□□ -1.77
CXCL12P48061 UBTFL6-201ENST00000477929 1024 ntBASIC4.02□□□□□ -1.77
CXCL12P48061 CDH12P2-201ENST00000504393 298 ntBASIC4.02□□□□□ -1.77
CXCL12P48061 MTCO3P42-201ENST00000509488 518 ntBASIC4.02□□□□□ -1.77
CXCL12P48061 KRT19P6-201ENST00000510983 209 ntBASIC4.02□□□□□ -1.77
CXCL12P48061 AC074250.1-201ENST00000511117 192 ntBASIC4.02□□□□□ -1.77
CXCL12P48061 MTCO3P39-201ENST00000514812 518 ntBASIC4.02□□□□□ -1.77
CXCL12P48061 RNU6-352P-201ENST00000516908 107 ntBASIC4.02□□□□□ -1.77
CXCL12P48061 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.02□□□□□ -1.77
CXCL12P48061 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.02□□□□□ -1.77
CXCL12P48061 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.02□□□□□ -1.77
CXCL12P48061 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.02□□□□□ -1.77
CXCL12P48061 U3.45-201ENST00000607547 219 ntBASIC4.02□□□□□ -1.77
CXCL12P48061 AC092354.2-201ENST00000607786 514 ntBASIC4.02□□□□□ -1.77
CXCL12P48061 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.02□□□□□ -1.77
CXCL12P48061 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL12P48061 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.02□□□□□ -1.77
CXCL12P48061 SYT14P1-202ENST00000600441 1448 ntBASIC4.02□□□□□ -1.77
CXCL12P48061 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
CXCL12P48061 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL12P48061 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CXCL12P48061 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.02□□□□□ -1.77
CXCL12P48061 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CXCL12P48061 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CXCL12P48061 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.01□□□□□ -1.77
CXCL12P48061 MTCO1P12-201ENST00000414273 1543 ntBASIC4.01□□□□□ -1.77
CXCL12P48061 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CXCL12P48061 AP002001.2-201ENST00000529025 1469 ntBASIC4.01□□□□□ -1.77
CXCL12P48061 RNA5SP22-201ENST00000365393 109 ntBASIC4.01□□□□□ -1.77
CXCL12P48061 MIR183-201ENST00000384958 110 ntBASIC4.01□□□□□ -1.77
CXCL12P48061 AL139247.1-201ENST00000422768 325 ntBASIC4.01□□□□□ -1.77
CXCL12P48061 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.01□□□□□ -1.77
CXCL12P48061 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.01□□□□□ -1.77
CXCL12P48061 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.01□□□□□ -1.77
CXCL12P48061 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.01□□□□□ -1.77
CXCL12P48061 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CXCL12P48061 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.01□□□□□ -1.77
CXCL12P48061 AC108751.2-201ENST00000469993 231 ntBASIC4.01□□□□□ -1.77
CXCL12P48061 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.01□□□□□ -1.77
CXCL12P48061 AC108145.1-201ENST00000503770 153 ntBASIC4.01□□□□□ -1.77
CXCL12P48061 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CXCL12P48061 AC090151.1-201ENST00000520784 730 ntBASIC4.01□□□□□ -1.77
CXCL12P48061 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.01□□□□□ -1.77
CXCL12P48061 CYCSP28-201ENST00000534284 321 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms