Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXC13P31276 MTND3P24-201ENST00000506306 329 ntBASIC4.84□□□□□ -1.63
HOXC13P31276 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXC13P31276 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXC13P31276 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC13P31276 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXC13P31276 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXC13P31276 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXC13P31276 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC13P31276 RNF138P2-201ENST00000603490 592 ntBASIC4.84□□□□□ -1.63
HOXC13P31276 AC079610.2-201ENST00000604818 690 ntBASIC4.84□□□□□ -1.63
HOXC13P31276 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HOXC13P31276 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HOXC13P31276 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC13P31276 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC13P31276 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC13P31276 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXC13P31276 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC13P31276 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
HOXC13P31276 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC13P31276 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXC13P31276 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC13P31276 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HOXC13P31276 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC13P31276 RNA5SP388-201ENST00000362584 119 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 RNU1-83P-201ENST00000363426 164 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 RN7SKP227-201ENST00000364445 330 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
HOXC13P31276 AC025750.1-201ENST00000399891 379 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HOXC13P31276 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXC13P31276 AC019070.1-201ENST00000415008 1024 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 AC140479.3-201ENST00000418944 1126 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 RPL36AP10-201ENST00000421785 322 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 AC073310.1-201ENST00000423226 1033 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC13P31276 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC13P31276 AC074367.1-201ENST00000438685 1125 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC13P31276 RPS27P5-201ENST00000444247 244 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 TDGF1P1-201ENST00000445734 527 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 H2AFZP5-201ENST00000446960 382 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC13P31276 AL031584.1-201ENST00000447169 754 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 AC090142.1-201ENST00000465776 462 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 RPL23AP73-201ENST00000492507 471 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC13P31276 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXC13P31276 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXC13P31276 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC13P31276 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.83□□□□□ -1.64
HOXC13P31276 AC138938.1-201ENST00000515431 782 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC13P31276 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.83□□□□□ -1.64
HOXC13P31276 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC13P31276 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC13P31276 AC074029.1-201ENST00000552531 1044 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXC13P31276 AC084783.1-201ENST00000565846 910 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXC13P31276 RPAP2P1-201ENST00000603626 1168 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXC13P31276 AC024933.1-201ENST00000608472 348 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXC13P31276 AP006248.3-201ENST00000623580 594 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXC13P31276 RAD17P1-201ENST00000418130 2042 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 AL592148.3-201ENST00000608771 2646 ntBASIC4.83□□□□□ -1.64
HOXC13P31276 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXC13P31276 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC13P31276 HSPA8P19-201ENST00000505359 1517 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 AP001002.1-201ENST00000625148 1513 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC13P31276 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC13P31276 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC13P31276 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC13P31276 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HOXC13P31276 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC13P31276 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXC13P31276 RNU6-252P-201ENST00000363232 107 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 RPL32P23-201ENST00000397237 405 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 USP9YP19-201ENST00000412165 485 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 TCEA1P4-201ENST00000415066 844 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 LINC01347-201ENST00000417964 355 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC13P31276 NPM1P34-201ENST00000428821 893 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 RPL17P35-201ENST00000432217 549 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 RPS6P12-201ENST00000432491 726 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXC13P31276 RPL7P29-201ENST00000437151 728 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXC13P31276 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXC13P31276 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXC13P31276 AC069540.1-201ENST00000446320 988 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXC13P31276 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXC13P31276 AL445433.1-201ENST00000457507 257 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 RPL21P103-201ENST00000479921 488 ntBASIC4.82□□□□□ -1.64
HOXC13P31276 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXC13P31276 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms